Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02284 ATGGAAGTGGGGGAGGTGGTGAAAGAGCTACCCATTGGCCCTTTAGAGTTTGGACTGTTGTGGGTGGTTAGGTTCTTGGAAAATCCTATCATGAGTAGTTGTGTGAAGCCGATGATGCAGAACAAGGAAAATCCAATTGTCCTACTTCATGGCTTTGACAGCTCATGTTTAGAATGGAGATATACATATCCATTGCTTGAGGAAGCTGGTTATGAGACATGGGCTGTTGACATTCTTGGTTGGGGTTTCTGTGATCTAGAGAAACTTCCTTCATGTGATGTGGTATCAAAGCGTGATCATTTTTATCAGTTTTGGAAGTCCCACATCAAAAAGGCAATGATATTGGTTGGTCCAAGCCTTGGCTCTGCATTTGTCATTGATTTTGCAATCAATTATCCAGAAACTGTGGAAAAGCTTGTTTTGATTGATGCTAGTGTGTATGCAGAAGGAACAGGAAACCTAGCAACCTTACCTAAAGCAGCAGCCTATGCTGGGGCATATCTATTGAAGAGCATTCCATTACGCGTATATGCTAACCTTTTGTGCTTCACAAACTTGCCTTTCAGTACTAGCCTCGATTGGACTAACGTGGGTCGCTTGCATTGTTTATTTCCATGGTGGGAGGATGCCACTGTTGATTTTATGACTAGCGGTGGTTATAATGTTGTCTCCCAGATAAAAAAGGCTCATAATATTGGAGCTTTATTGAACCATGCTTTCAACAAGGAGCTGATGATACAACTTGGACAAAGGACCAGTTGGCGTTACCACAAATTCTCCAAGAAGATAGCAAAAGTCAAAATAGCCAAAGAGGCTCTGAACATTTTGAAGTTGTCATACAAAGGAGTAGAGAAAGCTAAGAAATTCAAACTGCAATCCATGCATCGAGAATATGAAAAATATGAGATGTCTGGTTTAGAAACCTCTGATCATGTGGTGACTACAATAATTGAGTCCTACAACACAGACACCATGACAATTGCAGAATTGCGAGGGGGCATTATAAAGCAGAAAACTCTAATCATTTGGGGAGAGAATGACCGCATAATCAGCAATAAGCTTGGTGTGCAACTGCATTGTGAATTACCTGATGCCATTATACGCCAAATACCAGATTGTGGTCACCTTCCTCATGTTGAAAGACCAGATTCTGTTTTCAAATTGATTGTTGAATTTGTTCAGAGCAAGAGCACCACAGAAAATGAATGTGTTTCACCTTTGTGA 1224 0.4085 MEVGEVVKELPIGPLEFGLLWVVRFLENPIMSSCVKPMMQNKENPIVLLHGFDSSCLEWRYTYPLLEEAGYETWAVDILGWGFCDLEKLPSCDVVSKRDHFYQFWKSHIKKAMILVGPSLGSAFVIDFAINYPETVEKLVLIDASVYAEGTGNLATLPKAAAYAGAYLLKSIPLRVYANLLCFTNLPFSTSLDWTNVGRLHCLFPWWEDATVDFMTSGGYNVVSQIKKAHNIGALLNHAFNKELMIQLGQRTSWRYHKFSKKIAKVKIAKEALNILKLSYKGVEKAKKFKLQSMHREYEKYEMSGLETSDHVVTTIIESYNTDTMTIAELRGGIIKQKTLIIWGENDRIISNKLGVQLHCELPDAIIRQIPDCGHLPHVERPDSVFKLIVEFVQSKSTTENECVSPL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02284 407 Gene3D alpha/beta hydrolase 225 395 IPR029058 -
Vimu11g02284 407 Pfam Serine aminopeptidase, S33 44 149 IPR022742 -
Vimu11g02284 407 Gene3D alpha/beta hydrolase 40 190 IPR029058 -
Vimu11g02284 407 PRINTS Alpha/beta hydrolase fold signature 129 142 IPR000073 -
Vimu11g02284 407 PRINTS Alpha/beta hydrolase fold signature 70 85 IPR000073 -
Vimu11g02284 407 PRINTS Alpha/beta hydrolase fold signature 115 128 IPR000073 -
Vimu11g02284 407 PANTHER HYDROLASE 299 396 - -
Vimu11g02284 407 SUPERFAMILY alpha/beta-Hydrolases 44 393 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02284 Vimu-Chr11 39673199 39682577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02284 45 393 Acyl Lipid Metabolism Gene Families AT3G10840 22.253 1.24e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02284 - - gmx:100814882 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02284 11 39673199 39682577 Vimu11g02284 11 39673199 39682577 ECH
Vimu11g02284 11 39673199 39682577 Vimu7g00194 7 2382307 2388249 PCT