Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02282 TTGAAACTAGAATTACAACAGTCTTACCCTCTCCCCGCATTCTTAGCCTTCTTTCTCGCATTCTTCTTATTCTTCATTTTCTTCTTCATCATCTTTTTCTTCTTCTTCTCCACAACCACTTCCATTTTCAAACCCTTCTTCCTCTCATTCAACATAACAATGTCCTCGGAGAAGGAGAGAGAGACCCAAGTTTACATCGCCAAGCTCTCTGAGCAAGCTGAGAGATATGAAGAAATGGTTGAATGCATGAAGGCGATTGCAAAACTTGATCTAGAATTGACCGTGGAAGAGAGGAATCTGCTGTCGGTGGGATATAAAAATGTGATTGGTGCACGAAGAGCTTCTTGGCGCATTATGTCATCTATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAACAATGCAAAAATGATAAAGAATTATCGTCAGAAAGTGGAAGAGGAACTCTCCAAAATTTGCAGCGATATTCTGTCAATTATTGACAAGCATCTTGTTCCTTCTTCCACTTCAGGAGAAGCCACCGTTTTCTACTATAAGATGAAGGGTGACTATTATCGATATCTAGCTGAGTTCAAGACCGACCAAGAAAGAAAGGAGGCAGCTGAGCAATCACTGAAGGGATACGAGGCTGCTTTAGCTGCAGCAAACACAGATCTTCCATCAACACATCCAATTCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAGCAAGCTTTCGATGAAGCAATTGCTGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACCTTGATCATGCAGCTCTTGAGAGATAATCTCACTCTCTGGACCTCCGATTTGCCCGAGGATGGAGGTGATGAAATCAAACCAGAAGAAATCAAACCTGCTGCTCCTGAGGATGGTCAACGTTTTAATCAATGCCTAGTAATTTTCTTTTGGTCAAAAAGCCATCATGATTTTCTAGCTCAACAATTAACTCGGTTAAGAAATGCTTTGCATTGGAATGCACTGAAGATAAGATGCGTCTGTGCCTGGAGCAATGCAGTTCATTTGGACCAGAAAATGCAGATTATAGCTACTTCATAG 1119 0.4155 MKLELQQSYPLPAFLAFFLAFFLFFIFFFIIFFFFFSTTTSIFKPFFLSFNITMSSEKERETQVYIAKLSEQAERYEEMVECMKAIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNAKMIKNYRQKVEEELSKICSDILSIIDKHLVPSSTSGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAALAAANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKPEEIKPAAPEDGQRFNQCLVIFFWSKSHHDFLAQQLTRLRNALHWNALKIRCVCAWSNAVHLDQKMQIIATS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02282 372 Coils Coil 248 268 - -
Vimu11g02282 372 Pfam 14-3-3 protein 67 288 IPR023410 -
Vimu11g02282 372 ProSitePatterns 14-3-3 proteins signature 1. 98 108 IPR023409 -
Vimu11g02282 372 ProSitePatterns 14-3-3 proteins signature 2. 270 289 IPR023409 -
Vimu11g02282 372 PRINTS 14-3-3 protein zeta signature 141 165 IPR000308 -
Vimu11g02282 372 PRINTS 14-3-3 protein zeta signature 172 194 IPR000308 -
Vimu11g02282 372 PRINTS 14-3-3 protein zeta signature 92 121 IPR000308 -
Vimu11g02282 372 PRINTS 14-3-3 protein zeta signature 261 290 IPR000308 -
Vimu11g02282 372 PRINTS 14-3-3 protein zeta signature 207 233 IPR000308 -
Vimu11g02282 372 PRINTS 14-3-3 protein zeta signature 234 260 IPR000308 -
Vimu11g02282 372 SMART 1433_4 60 301 IPR023410 -
Vimu11g02282 372 Coils Coil 198 218 - -
Vimu11g02282 372 Gene3D - 46 299 IPR036815 -
Vimu11g02282 372 Coils Coil 66 86 - -
Vimu11g02282 372 PANTHER 14-3-3 PROTEIN 60 290 IPR000308 -
Vimu11g02282 372 SUPERFAMILY 14-3-3 protein 59 290 IPR036815 -
Vimu11g02282 372 FunFam 14-3-3 protein epsilon 54 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02282 Vimu-Chr11 39654540 39658168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02282 55 312 14-3-3 family AT1G26480 84.674 1.61e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02282 - K06630 gmx:100815948 482.256