Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02265 ATGTCATCTCCTCTCATCTGGCGCGCAAAAGCCTCTTATTCATCTGTTTGCTGGTTCAAGCAACTTGTGTTTGCACTACGGTGGTGGCACAATAGTCGATGGTGTTCGTGCGGTGGTGCGGTGGTTTGGTGGTCGTGTGGTGATGTGTATCCTCTGTTCTGTGTAGGGAGGCTTTTGACATTTTTGTTTCTGATAGGATATAATGGTCCTGGTATGAGGGACTTTCGGCAATTTTGTAGATTGAGCTTTAGCTTTGTGAAGGGGAAACCCTTGGAGGAGAGAGTAAGGAGGAGAAGCATGGAAGGGAGAGTTAGCGCATTGGAGAGAGCAATAGAGAAACTAAGGGAGGAATCCGGAGGAAATTTCCAAGAACTTAAAGATATGATGAAAGAAATGTTGCAGAAATCCAAGAATCACAAAAAAGGCTTAGAAGGAAGTGAGAAATCTGTCATGAAAGGAAAGAAAGAGGGAAAAACAGGTATGGATGCTGAGAAAGATAGTCTGCAAAACATCACGAAAGGCAAGAAATTCTCGGAAGAAGGAGAGTTTTTGGCTAATGATGAAGAGAAGAAGGAAGAAAGATATCCACAGAGTACTAAACCATATGAGGAGGGAGAGAAATTGTTGAGGCCTGGGGCTAAAACAATGGTCTCATGGAGCAACCCAATTGAGGTCTTGGTGTCCATGGGTGTATCCACTATAGCAGTTATAGATCCATATCCTGAAATTTCTGACGTTATAAAACCTACAGATCTTGCTTCTGGGAATGGCCACAAAGGAATTTCCAATTATCTTGCAAAGTCTTTATCAACTAGCCATCTTGAATTACTCACAATGGAGGAAGGTAAAGATGGTAGGAAAGAAACTTCAGGAATGGAAGTAGTGCAAACAGTTTCAGAGCAAACTGCGACACTTGTGCTTTACAGGGATATACCAGATGTTATCTACCTTAAGGATTCTCTCAATGCGGTTCAGAATGCTACACAAGTTAGGAAACAGTTAGCTCGGCATGATGATGATGATGATGATGAATTTGGATGGTCAAATCAACAAGCTCTTTCCTTTTTAGCTTCTAGGATGAACAAGTCTGGACAAGGAGAGGGTTTAGCCAATGCTGCTGTTATACAAATACAGAAAAAGTTTCAGCATTGGAAGAAGGGAAAAGAATTCTTGATCATTCGTCAAAGAATTGAAAAGAAGCAGTTCTTATCATTAATCGAACAAGAGGAGTCAACAATTCTCTCATATCGACCACCACCCAAGCCTCCAGACCTAAATTGGAGGGCAGTAGCCAGTGGGTTCCCTTCCTATGATAACACATTTATGAAGATGAGCCATGGGAATAAGCTTCACTATTCCAACCTTGAGGACAAGGTTGTTAAGGTGAGTGAGGTTTCCTTTATATTGTTGGAGGGTCCTGGTATGCGGGGGACTTTTGGCAATTTTTCTATACCATACAGAGCTACTTCTTATCTTACATTAAACTGTATTAAGCAACAAAAGAATGCTCTTAGATCATTGTTTGCTTCAGAGGAATGGGCTACTAGTCCACATGGTACTAAAAGTGACGGTAACCAAGTGATGAATCTAGTGTTGAGTGATGACAGATTTTGGAGACCAATCACCTATTGTTTAAAATGTGTGATTCCACTTGTAAAAGTGTTGAGGCTGGTAGATGGTGATGCAAAACCAGCTATGCCATATATTTATGAAGCATTGGATAGAGCCAAAGAGAAAATTGCTGAAAATTTCCAAAAGATAGAAACAAGGTATAAAAGAGTGTGGAAAATTATTGACACTAGGTGGAATTTACAACTACAAAGGCCTCTCAATGCAGCAGCCTATTATCTCAATTCTAGGTGCAACAGGGAAGAAAATGAAGACATTAATGAAGGGGAAGAACTTTCAGTAGAAGATGAAGATGACTTAAGTGATGTAGATCTTGGAGAGGATGAGGATGAAATGTGA 1968 0.406 MSSPLIWRAKASYSSVCWFKQLVFALRWWHNSRWCSCGGAVVWWSCGDVYPLFCVGRLLTFLFLIGYNGPGMRDFRQFCRLSFSFVKGKPLEERVRRRSMEGRVSALERAIEKLREESGGNFQELKDMMKEMLQKSKNHKKGLEGSEKSVMKGKKEGKTGMDAEKDSLQNITKGKKFSEEGEFLANDEEKKEERYPQSTKPYEEGEKLLRPGAKTMVSWSNPIEVLVSMGVSTIAVIDPYPEISDVIKPTDLASGNGHKGISNYLAKSLSTSHLELLTMEEGKDGRKETSGMEVVQTVSEQTATLVLYRDIPDVIYLKDSLNAVQNATQVRKQLARHDDDDDDEFGWSNQQALSFLASRMNKSGQGEGLANAAVIQIQKKFQHWKKGKEFLIIRQRIEKKQFLSLIEQEESTILSYRPPPKPPDLNWRAVASGFPSYDNTFMKMSHGNKLHYSNLEDKVVKVSEVSFILLEGPGMRGTFGNFSIPYRATSYLTLNCIKQQKNALRSLFASEEWATSPHGTKSDGNQVMNLVLSDDRFWRPITYCLKCVIPLVKVLRLVDGDAKPAMPYIYEALDRAKEKIAENFQKIETRYKRVWKIIDTRWNLQLQRPLNAAAYYLNSRCNREENEDINEGEELSVEDEDDLSDVDLGEDEDEM 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02265 655 Coils Coil 97 117 - -
Vimu11g02265 655 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 224 401 - -
Vimu11g02265 655 MobiDBLite consensus disorder prediction 179 201 - -
Vimu11g02265 655 MobiDBLite consensus disorder prediction 136 161 - -
Vimu11g02265 655 SUPERFAMILY Ribonuclease H-like 489 649 IPR012337 -
Vimu11g02265 655 Coils Coil 570 590 - -
Vimu11g02265 655 MobiDBLite consensus disorder prediction 626 655 - -
Vimu11g02265 655 MobiDBLite consensus disorder prediction 628 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02265 Vimu-Chr11 39346586 39349499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02265 223 401 CAMTA Transcription Factor Family AT5G64220 45.078 6.30e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02265 - K21596 ccaj:109796423 242.662