Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02236 ATGGTAATTACTTCAGTGAGTGTTTTCAAGATTATCTTTGTTTTCTTCATTCTCTTCACTCTTCTCACACCTCAAGCCGTGGCTGATTGTAAAGCTGAATTAGCAAACACATGCAACAACAAAGAGAAAGCGTTGTCACTAAAAGTCATAGCCATATTCACCATCTTAGTATCCAGCATAATCGGTGTGACACTGCCTTTAGTGACACGTTCAGTTCCCGCTTTGAGCCCTGAAAACGATCTCTTCATAATTGTGAAATGCTTCGTAGCTGGTATAATAATTGGGACGGGCTTCATGCACGTGCTTCCCGATTCCTTTGACATGTTGTGGTCTGATTGCTTGAAGGAGAAACTTGTTGAGATAAACTTAAATTTTAGGGTTTTATTAATAATTTTGTTTAAATCTTATTTTATTACTTTTGGGTCTAGTAATATTTGGTTTGATTTGATAGAGATAAAATTAGGATGGGTA 471 0.3652 MVITSVSVFKIIFVFFILFTLLTPQAVADCKAELANTCNNKEKALSLKVIAIFTILVSSIIGVTLPLVTRSVPALSPENDLFIIVKCFVAGIIIGTGFMHVLPDSFDMLWSDCLKEKLVEINLNFRVLLIILFKSYFITFGSSNIWFDLIEIKLGWV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02236 157 PANTHER ZINC/IRON TRANSPORTER 44 133 - -
Vimu11g02236 157 Pfam ZIP Zinc transporter 46 130 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02236 Vimu-Chr11 38963342 38966006 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02236 11 117 Inorganic Solute Cotransporters AT4G19690 57.009 5.10e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02236 K14709 - gmx:100795511 184.496