Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02233 ATGGCAATTACTTCCGTGAGTCTTTTCAAGATTATCTTTGTTTTCTTCATTCTCTTCACTCTTCTCACACCTCAAGCCGTGGCTGATTGTGAAGCTCAATCAGCAAACACATGCAACAACAAAGAGAAAGCCTTGTCACTAAAAGTCATAGCCATATTCACCATCTTAGTCTCCAGCATAATCGGTGTGACACTGCCCTTAGTGACACGTTCAGTTCCAGCTTTGAGCCCTGAAAACGATCTCTTCATAATTGTGAAGTGCTTCGCAGCTGGTATAATTCTTGGGACGGGCTTCATGCACGTGCTTCCCGATTCCTTTGACATGTTGTGGTCTGAGTGCTTGAAGGAGAAACCGTGGCACGAGTTTCCATTTTCGGGGCTCGTGGCTATGTTTTCTGCTATAATAACGATGATGGTGGATTCTTTGGCTACTAGTGTTTACACCAAGAGGAGTAAGACTGAGATTATTCCCGCTGAGAGCAGCCCTGCAGGTGGTGGAGACCAAGAGATGGGTGCTGTTGTTAACTTTGGCCACTTCCATGGCCACCACCACAACCACCCTGAGAACAAGGCAGAAGGCCAAGAATCACAGCTTCTACGTTATCGTGTTGTTGCCATGGTATTAGAACTTGGAATTGTGGTTCATTCAGTGGTTATAGGACTTGGCATGGGAGCCTCAAACAACACATGCACCATAAAAGGTCTAATAGCTGCGCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTAGGAGGGTGCATTCTGCAGGCCCAGTACAAGTTCTTAAAGAAGGCCATCATGGTGTTTTTCTTCTCCGTGACAACCCCATTTGGAATTGCCCTAGGAATTGCATTGTCGACGACCTATAGAGAGAACAGTCCAAGTGCACTCATCACTGTGGGGTTGCTGAATGCTTCTTCTGCTGGTCTTTTGATCTACATGGCTTTGGTTGACCTTCTTTCTGCTGATTTCATGAGCCCTAGATTGCAGGGTAGCGTCAACCTTCAATTGAAATCTTACTTAGCAGTGTTTTTGGGTGCTGGTGGCATGTCTCTCATGGCAAAATGGGCTTAG 1074 0.46 MAITSVSLFKIIFVFFILFTLLTPQAVADCEAQSANTCNNKEKALSLKVIAIFTILVSSIIGVTLPLVTRSVPALSPENDLFIIVKCFAAGIILGTGFMHVLPDSFDMLWSECLKEKPWHEFPFSGLVAMFSAIITMMVDSLATSVYTKRSKTEIIPAESSPAGGGDQEMGAVVNFGHFHGHHHNHPENKAEGQESQLLRYRVVAMVLELGIVVHSVVIGLGMGASNNTCTIKGLIAALCFHQMFEGMGLGGCILQAQYKFLKKAIMVFFFSVTTPFGIALGIALSTTYRENSPSALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGSVNLQLKSYLAVFLGAGGMSLMAKWA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02233 357 Pfam ZIP Zinc transporter 46 354 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu11g02233 357 NCBIfam ZIP zinc/iron transport family 30 357 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vimu11g02233 357 PANTHER ZINC/IRON TRANSPORTER 44 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02233 Vimu-Chr11 38949355 38951370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02233 25 357 Inorganic Solute Cotransporters AT1G31260 64.392 1.12e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02233 K14709 - gmx:100795511 583.178