Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02232 ATGGCAATTACTTCAGCGACTTTTTTCAAGATTATCTTTGTTTTCTTCATTCTCGTCACTCTTCTCACACCTCAAGCCGTGGCTGATTGTGAAACTCAATCAGCAAACGCATGCAACAACAAAAAGAAAGCCCTGCCTCTAAAAGTCATAGCCATATTCGCCATTTTAGTTTGTAGCATAATCGGTGTCACACTACCCTTAGTGACACGTTCAATCCCAGCTTTGAGTCCTGAAAACGATCTCTTCGTAGTTGTGAAATGCTTCGCGGCTGGTATAATTCTAGGCACGGGGTTCATGCACGTCCTTCCCGATTCCTTTGACATGTTGCGGTCTGATTGCTTGAAGGAGAAACCGTGGCACAAGTTTCCATTTTCGGGATTTGTTGCTATGTTCTCTGCTATTATAACGATGATGGTGGATTCTTTGGCTACTAGTGCTTACACAAAGAAGATTAGGACTGAGATTATTTCATCTCAGAGCAGCCCTGCAGGTGGTGGAGACCAAGAGATGGGTGGTGTTATTAACTTTGGCCATTTCCATGGCCACCGCCATGACCACCCTGAGAACAAGACAGAAGGCCAATCACAGCTTCTACGTTATCGTGTTATTGCCATGGTATTAGAACTTGGAATCGTGGTTCATTCAGTGGTTATAGGACTTGGCATGGGAGCCTCAAACAACACATGCACCATCAAAGGCCTAATAGCTGCGCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTCGGAGGGTGCATTCTGCAGGCACAATACAAGTCCTTAAAAAATGTCACTATGATGTTTTTCTTTTCCGTGACAACCCCATTTGGAATTGTCCTAGGAATTGCATTGTCGACAATCTACAGAGAAAACAGTTCAAGAGCACTCATCACTGTGGGGTTGCTGAACGCTTCTTCTGCTGGTCTTTTGATTTACATGGCTTTGGTTGATCTTCTTTCTACTGATTTCATGAGCCCTAGATTGCAAGGAAGCATCAACCTTCAATTAAAATCTTACTTAGCACTGTTTTTGGGTGCTGCTGGCATGTCTCTCATGGCAAAGTGGGCTTAG 1071 0.4398 MAITSATFFKIIFVFFILVTLLTPQAVADCETQSANACNNKKKALPLKVIAIFAILVCSIIGVTLPLVTRSIPALSPENDLFVVVKCFAAGIILGTGFMHVLPDSFDMLRSDCLKEKPWHKFPFSGFVAMFSAIITMMVDSLATSAYTKKIRTEIISSQSSPAGGGDQEMGGVINFGHFHGHRHDHPENKTEGQSQLLRYRVIAMVLELGIVVHSVVIGLGMGASNNTCTIKGLIAALCFHQMFEGMGLGGCILQAQYKSLKNVTMMFFFSVTTPFGIVLGIALSTIYRENSSRALITVGLLNASSAGLLIYMALVDLLSTDFMSPRLQGSINLQLKSYLALFLGAAGMSLMAKWA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02232 356 PANTHER ZINC/IRON TRANSPORTER 44 350 - -
Vimu11g02232 356 NCBIfam ZIP zinc/iron transport family 30 356 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vimu11g02232 356 Pfam ZIP Zinc transporter 47 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02232 Vimu-Chr11 38920675 38921991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02232 25 356 Inorganic Solute Cotransporters AT1G31260 63.235 7.29e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02232 K14709 - gmx:100801759 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02232 11 38920675 38921991 Vimu11g02232 11 38920675 38921991 ECH