Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02215 ATGGAGAAAGTTCTTGATGTAAGACTGAGCATGATAGCAGAGGAATACCCTTTGCCACCAATTCCACATCCCTACCCTCTATTTTCCAGGGAGTTCTTCCGCCGCCACGGTCGTGACCTCTTTGCATGTTCTTCAACATGGTTCCTCGTCGACATTGTCTTCTACAGCCAAGTTTTGTTCCAAAGTGAAATATACAAACGTTACCTGGACGAAAAGGGAAAAGCAGACGTCTATAAGGAGGCTATCCATGTCGCTTGGATCCAAGCAGTTATCACAGTGTGTTCCACCATCCCCGGTTACTTCTTCTCTGTCTACTTCATTGACAGATGGGGCAGGGTCAAAATTCAAATCATGGGTTTTTTCTTCATGGCAGTCATCTTTTTCATCATTGGAGTTCCCTATTACACTTATTGGACTACTCCCGACCATGAAGAGAACAAATGGTTCATGGTTTTGTATGGCCTTGCTTTTTTCTTTGCCAACTTTGGACCCAACACTACCACTTTCATAGTCCCTGCTGAGCTTTTCCCAGCCAGGTTTAGGTCAACTTGTCATGGCATTTCTGGGGCAGTTGGGAAGGTTGGAGCGATGATTGGGTCTGTGGGGTTTCTTTGGGCTTCTCATAAGAAGAAGGAGTATGGGTACAGTAAGGGAATTGGGATGCAGGTTACCCTTATCATACTTGGAGGAGTGTGCTTATTGGGAATGGTGATCACGTACTTTTTCACTAGGGAAACCATGGGAAGGTCCTTGGAAGAGAATGAGGTTGATACTGAGACCAATCAAGTAGAACAACATAGTAATCTTTGA 810 0.4469 MEKVLDVRLSMIAEEYPLPPIPHPYPLFSREFFRRHGRDLFACSSTWFLVDIVFYSQVLFQSEIYKRYLDEKGKADVYKEAIHVAWIQAVITVCSTIPGYFFSVYFIDRWGRVKIQIMGFFFMAVIFFIIGVPYYTYWTTPDHEENKWFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAMIGSVGFLWASHKKKEYGYSKGIGMQVTLIILGGVCLLGMVITYFFTRETMGRSLEENEVDTETNQVEQHSNL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02215 269 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 34 253 - -
Vimu11g02215 269 Pfam Sugar (and other) transporter 87 255 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu11g02215 269 Gene3D MFS general substrate transporter like domains 20 269 IPR036259 -
Vimu11g02215 269 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 247 IPR020846 GO:0022857
Vimu11g02215 269 SUPERFAMILY MFS general substrate transporter 20 255 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02215 Vimu-Chr11 38700580 38701389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02215 1 255 Inorganic Solute Cotransporters AT1G76430 57.854 8.01e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02215 K08176 - gmx:100797683 469.544