Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02214 ATGGGGCTCTTCACCGATGCCTATGACCTTTTCTCAATCACTCTCATCATCAAGATGATGGGAAGGATATATTACGACCACCGCAAGGGAGAAAACCAGTTTCAGACCCCGCCGCTGGTCACTTCCGCCCTCGTTGCTGCTGCTCTTCTGGGCACCGCCGTCGGTCAGCTCCTGTTCGGAAGGCTCGGCGATCTCAAGGGGCGCCGCCGAGTGTACGGATTCGCCTTGCTGTTGATGGTTTATGTTGGGGCTGGGGATTGGTGGGGACTACCCTCTGTCTTCAACGATAATGTCGGAGTTTGCGAACAAGAGGACACGAGGGTCGTTCATAGCGGCGGTGTTTTCGATGCAAGGGTTCGGCATATTGGCCAGCTCCACCGTGACGGTGGTGGTGTGCTCCATTTTTCGTGCGGCGTCGAAGTCGTCGGAGGCTGA 435 0.5655 MGLFTDAYDLFSITLIIKMMGRIYYDHRKGENQFQTPPLVTSALVAAALLGTAVGQLLFGRLGDLKGRRRVYGFALLLMVYVGAGDWWGLPSVFNDNVGVCEQEDTRVVHSGGVFDARVRHIGQLHRDGGGVLHFSCGVEVVGG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02214 144 SUPERFAMILY MFS general substrate transporter 1 81 IPR036259 -
Vimu11g02214 144 Gene3D MFS general substrate transporter like domains 1 96 IPR036259 -
Vimu11g02214 144 Pfam Sugar (and other) transporter 2 80 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02214 Vimu-Chr11 38698468 38699245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02214 1 85 Inorganic Solute Cotransporters AT2G32830 51.765 5.90e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02214 K08176 - gmx:100803834 124.405