Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02185 ATGGATGACATTGTACCAATCAAGAGAGGGAAGAGTTTACTTGCAGTATATTGGTCAACTCAGATGGGCCTGTCTCTTAATATTGATGTCTCAGCTAGGGCATTTTATGAGGCCATTCCTGTCCTTGACTTCGTTTTGAAGAATTTTAGACTTGATCTTCCTAGGCCTTTGCCCGATCAAGACCGAATTAAGGTATTGTGCTGGAAATTTGTGTCGTTCTTTATTCTTATTGAGTTACATTTTTCTCGTAAATGCATACCAATGACATTTTTTCATGGCGGCAATCATCCAAGCTCCTATGCCAGAAAGAACTCTTCCTGCATTGGATAA 330 0.397 MDDIVPIKRGKSLLAVYWSTQMGLSLNIDVSARAFYEAIPVLDFVLKNFRLDLPRPLPDQDRIKVLCWKFVSFFILIELHFSRKCIPMTFFHGGNHPSSYARKNSSCIG 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02185 109 Pfam Argonaute linker 1 domain 20 37 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02185 Vimu-Chr11 38269922 38270408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02185 20 65 Eukaryotic Initiation Factors Gene Family AT1G48410 57.447 2.20e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02185 K11593 - vra:106778205 90.8929