Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02174 ATGGAAGTGGAAATCCCAGCTGCAGCTGTGAAAGAATCTGAGCAACTGAAGTTTGCTCTACCTGTGGATTCTGAAAACAAGGCCACCGTGTTCAGATTGTTTTCCATAGCTAAACCCCACATGAGATCTTTTCACCTATCGTGGATCTCTTTTTTCTCATGCTTTGTGTCTAGCTTTGCTGCTCCACCCCTCCTTCCCATTATCCGGGACAACCTGAACCTCACAGCTACTGACATTGGAAATGCTGGTGTTGCATCAGTTTCCGGTGCAGTATTCGCAAGAATTGCAATGGGAACAGCTTGTGACTTAGTTGGACCACGCCTGGCCTCTGCATCACTCATCCTCCTCACAGCACCATTTGTGTACTTCACTTCCATCATCAACTCAGCCACCTCGTACCTCCTTGTCCGTTTCTTCGCCGGCTTCTCCCTGGCCACCTTTGTCTCCACACAGTTCTGGATGAGCTCTATGTTCTCTGCTCCGGTGGTCGGTTCGGCAAACGGATTTTCCGGCGGATGGGGCAACCTTGGAGGAGGAGCCACCCAACTCATCATGCCCCTTGTCTTCTCCGTCATCCGTGACATTGGCGCTAGCAAATTCACAGCATGGAGGATTGCATTCTTTGTCCCTGCCATGTTCCAGATGCTCACGGCTTTTTCAATCCTGATATTTGGGCAGGACATGCCCAATGGAAACTTCCAGCGGTTGAAGAAGTCAGGGGAGAAAGCAAAAGACGAATTCTCAAGAGTGGTGTATCATGGGATCAGTAACTACAGAGGGTGGATTCTGGCGTTGACTTACGGCTACTGCTTTGGGGTGGAGTTGACCATAGACAACATCATAGCTGAATACTTCTATGACAGGTTTAATCTGAAACTCCACACTGCAGGAATCATTGCTGCAAGCTTTGGGTTGGCTAACTTGTTTTCTAGACCTGGTGGGGGTTATATATCAGATGTAATGGGAAAGAGGTTTGGCATGAGAGGGAGGTTGTGGGCTTTATGGCTGTGCCAAACCTTGGCTGGTGTCTTCTGCATCATCCTTGGCCTTGTCGGATCTTTAGGTGTATCCGTCCTTGTTATGATCATATTCTCTATCTTCGTCCAAGCTGCATGTGGAATGACCTTTGGGATTGTTCCCTTTGTCTCAAGAAGGTCATTGGGTGTGATATCTGGAATGACAGGAGGAGGAGGCAATGTGGGTGCAGTTGTGACCCAGCTAATTTTCTTCAAAGGATCCAAGTTTTCAAAAGAAAGAGGAATAACTCTAATGGGAAAGATCACGGAAGAAGATTACTACTTAGCTGAGTGGAACTCAAAGGAGAAGGAGAAAGGGTCCCATCATGCAAGCTTGAAATTTGCCGATAACAGCAAAAGTGAAAGAGGCAAAAAACTGAATGCATCAACAGAGCCTTATGAGGAGATCTAA 1428 0.4727 MEVEIPAAAVKESEQLKFALPVDSENKATVFRLFSIAKPHMRSFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTAPFVYFTSIINSATSYLLVRFFAGFSLATFVSTQFWMSSMFSAPVVGSANGFSGGWGNLGGGATQLIMPLVFSVIRDIGASKFTAWRIAFFVPAMFQMLTAFSILIFGQDMPNGNFQRLKKSGEKAKDEFSRVVYHGISNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANLFSRPGGGYISDVMGKRFGMRGRLWALWLCQTLAGVFCIILGLVGSLGVSVLVMIIFSIFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSKFSKERGITLMGKITEEDYYLAEWNSKEKEKGSHHASLKFADNSKSERGKKLNASTEPYEEI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02174 475 FunFam Nitrate transporter 2.1 244 429 - -
Vimu11g02174 475 FunFam High affinity nitrate transporter 2.5 36 232 - -
Vimu11g02174 475 SUPERFAMILY MFS general substrate transporter 37 409 IPR036259 -
Vimu11g02174 475 Gene3D MFS general substrate transporter like domains 243 425 IPR036259 -
Vimu11g02174 475 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 12 426 IPR044772 GO:0015112
Vimu11g02174 475 Gene3D MFS general substrate transporter like domains 36 234 IPR036259 -
Vimu11g02174 475 CDD MFS_NRT2_like 44 425 IPR044772 GO:0015112
Vimu11g02174 475 MobiDBLite consensus disorder prediction 440 475 - -
Vimu11g02174 475 Pfam Major Facilitator Superfamily 48 404 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02174 Vimu-Chr11 37881710 37884041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02174 17 471 Inorganic Solute Cotransporters AT1G12940 69.358 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02174 K02575 - gmx:100787888 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02174 11 37881710 37884041 Vimu11g02174 11 37881710 37884041 ECH