Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu11g02161 | ATGGCCAATAGAACTATTTCCTCAAAGTTTAACTTTCAAAAGGAATCTATAGAAGATGTAATTTCATTAGAATCAGAAAGACCAATAGTATACAACCTTGAGGAGATTGAAGAGGCTACGAATAACTTTGATGAAAGTCGAAAAATAGGAAGTGGTGGATACGGAAGTGTTTATTTTGGAGTGTTAGGGAACAAGGAAGTTGCTGTGAAGAAAATGAGGTCCAATAAATCTAAAGAGTTCTATGCAGAACTCAAGGTCTTATGTAAGATCCACCATATCAACATTTTAAGTAACAATTCTGATGATATTTTCTTTGACGAGGTGGAGCTGTTGGGATATGCAAATGGAAAAGATGACCTCTATTTGGTGTATGAGTACGTTCCAAATGGATCTCTCAGTGATCATCTTCATAATCCATTACTGAAAGGTCTTGAATATATACATGATTATACAAAAGCACGATATGTGCACCGTGACATAAAGAGTAGCAATATTCTACTTAAGGATAAATTCAGAGCAAAGGTGGGAGATTTTGGACTTGCAAAGCTGGTAGACAGAACCGATGATGAAAATTTTATTACAACCAGACTTGTAGGAACACCGGGCTACCTTCCACCAAAGGAGCTTCAAGTGACTCCAAAAACCGATGTGTTTGTGTTTGGAGTGGTGCTTTCAGAGCTGTTAACAGGGAAACGAGCATTATTCCGAAAAAGACAAGAAGAGATTAAAATGAAATCACTCATTAGTGTTGTTAATAAAATATTCCAAGATGATGAACCAGAGATTGCCTTGGAAGATGCCATAGATAAGAATCTGGAAGCAAGCTATCGGATGGAAGATGTCTACAAGATGGCAGAAATAGCTGAGTGGTGCTTGCAAGAAGATCCAATAGAGAGGCCTGAAATGAGGGATATAATTGGGGCACTGTCTCAGATTGTGATGTCCTCAATAGAGTGGGAAGCATCCCTGTGTGGAAATAGCCAGGTCTTCAGCGGGCTGTACAGTGGAAGATGA | 1014 | 0.3876 | MANRTISSKFNFQKESIEDVISLESERPIVYNLEEIEEATNNFDESRKIGSGGYGSVYFGVLGNKEVAVKKMRSNKSKEFYAELKVLCKIHHINILSNNSDDIFFDEVELLGYANGKDDLYLVYEYVPNGSLSDHLHNPLLKGLEYIHDYTKARYVHRDIKSSNILLKDKFRAKVGDFGLAKLVDRTDDENFITTRLVGTPGYLPPKELQVTPKTDVFVFGVVLSELLTGKRALFRKRQEEIKMKSLISVVNKIFQDDEPEIALEDAIDKNLEASYRMEDVYKMAEIAEWCLQEDPIERPEMRDIIGALSQIVMSSIEWEASLCGNSQVFSGLYSGR | 337 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu11g02161 | 337 | SMART | serkin_6 | 43 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu11g02161 | 337 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 12 | 331 | IPR044812 | GO:0019199|GO:0045087 | |
Vimu11g02161 | 337 | Pfam | Protein kinase domain | 44 | 305 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu11g02161 | 337 | FunFam | PTI1-like tyrosine-protein kinase 3 | 127 | 323 | - | - | |
Vimu11g02161 | 337 | Gene3D | Phosphorylase Kinase; domain 1 | 25 | 126 | - | - | |
Vimu11g02161 | 337 | SUPERFAMILY | Protein kinase-like (PK-like) | 26 | 309 | IPR011009 | - | |
Vimu11g02161 | 337 | ProSitePatterns | Protein kinases ATP-binding region signature. | 49 | 71 | IPR017441 | GO:0005524 | |
Vimu11g02161 | 337 | Gene3D | Transferase(Phosphotransferase) domain 1 | 127 | 323 | - | - | |
Vimu11g02161 | 337 | PIRSF | ILK | 22 | 324 | - | - | |
Vimu11g02161 | 337 | ProSiteProfiles | Protein kinase domain profile. | 43 | 314 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu11g02161 | 337 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 155 | 167 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu11g02161 | Vimu-Chr11 | 37376472 | 37378437 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu11g02161 | 23 | 337 | Receptor kinase-like Gene Family | AT1G51940 | 45.773 | 2.00e-96 | 297 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Vimu11g02161 | Pkinase | 1.5e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu11g02161 | - | - | gmx:100791718 | 559.681 |