Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02106 ATGGCGGAGCAGAGGAACCGTTGGAGCTGGGACGTCGCTGGCTTCGACCCATGGAAGTCATCCCCGCCGTCGCAATCTCCGCCGCCTCCCCTGGAGCACGCTGATCGGAAACCTACTGCGCCATTGGTGCGGCGCTACTCCATTTCTGCTACGTCGGTTCTTCCGCAACCCAGGCAGTCCGTGGCCTTGAAGCTACAACGGTTGAAAGACAAAGTCAAGTGTTCCAATGGTTTTAGCTTCTGCCTCGTAGCTAGTGCTTGCAACGACGACGTTTTAGCTCGTGTTTCCACTTTTACGAGCTGCGTTGTGGTTTCTACGAGTAGTTTCAGCTTGCGAAGAATGGGAAGGTGCAATGCTTGCGGGTCACGTGTTAACAATCACATCAGATATTTTGCACAGCTTGCTAGAGAAGACTATGTACAATTAAGACAAGAGGCAAATGAACTTCAAGAATATTCAAATGCAAAACTTGATCGAGTTACACGATATCTAGGTGTTCTTGCAGAGAAAACCCGCAAGCTAGATCATGTAGCCCTTGAAACTGAAGCAAAAATAGCTCCGCTGATCAATGAGAAAAGAAGACTATTCAATGATTTATTAACATCTAAAGGAAACATACGAGTATTCTGCCGAGCAAGGCCATTATTTGAAGATGAAGGTGCTTCAGTTGTTGAATTTCCAAATGACTATACCGTTAGTGTAAATACTGGTGATGAATCCTTGTCTAATGCCAAGAAAGACTTTGAATTTGACCGAGTTTATGGACCTCATGTGGGTCAAGCTGAGTTATTTAGTGATGTTCAACCACTGGTACAATCAGCTTTGGATGGATATAATGTTTCCATATTTGCATATGGACAAACGCATTCTGGAAAGACACACACTATGGAAGGATCAAGCTATGATCGAGGTTTATATGCTCGTTGTTTTGAGGAGTTGTTTGATTTATCCAATTTAGATTCAACTTCTACTTCTCAATATAAATTCTGTGTTACCGTCTGTGAGCTATATAATGAACAGACTAGGGATCTACTTTTGGAGGCAGGGAAAAACACTCCTAAACTCAGCTTGGGGTCACCTGAATGTTTTGTGGAACTGGCACAGGAAAAGGTTGACAATCCTGTTGAGTTTTCTGCAGTATTAAAAGCTGCATTGCAGACTCGGGAAAATGATTTGGCAAAGAATAATGTTTCTCATTTGATTGTCACGGTACACATATTTTATAACAATTTGATCACGGGTGAAAACTCATATAGTAAACTCTATATGGTTGATTTAGCTGGAAGTGAAGGTTTAATAACAGAAGATGATAGTGGGGACCGTGTCACAGATTTGCTGCATGTTATGAAGTCTCTTTCGGCGTTGGGAGATGTTTTGTCTTCTTTAACATCAAAGAAGGATATAATACCTTATGAAAATTCAGTGCTAACAAAACTGCTTGCAGATTCACTTGGTGGGAGTTCAAAAACTCTGATGATTGTGAATGTGTGTCCAAGTGTTTCAAATTTATCTGAGACATTGTCGTCTCTCAATTTCTCTGCTAGAGCTCGAAATTCTATGTTAAGCCTGGGAAATCGAGACACAATTAAGAAGTGGAGAGATGTTGCAAATGATGCACGAAAGGAGCTCTATGAGAAAGAAAAGGAAATTAATGATCTGAAGCAAGAGGCTTTGGAGCTCAAGCAAACGCTTAAAGATGCAAATGATCAGTGTGTTTTACTCTTTAATGAAGTGCAGAAGGCATGGAAAGTTTCTTCTGCATTGCAGACTGATTTAAAGTCGGAGCATGTTTTGCTGTCAGACAAACACAATATAGAGAAAGAACAAAATACTCAGCTTAGAAATCAAGTTGCTCAACTTCTACATTTAGAGCAAGATCAAAAATTGCGGATTCAAGAGCAAGATTCAACCATCCAAAGTTTGCAGGCTAAAATTAGGACCCTCGAAACTCAACTCAATGAAACTATTAAAGCTCAATCTAGTTCCATATCTGTATCAGAGCCAGAGTCTGCTGATCTATCCAATTCAAAATTTACTGGAGATGGCATAGACTCTTCTGCAGTAACCAGAAAACTAGAAGAGGAACTCAGGAAACGTGATGCACTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTAACTCAGAAAGCATCTACGGCTGGATCACCCAAGGATTTCAGCAACACATGGGATACCTCTGGCTCCCTAAAATTCATGCCTTATTTTCAGTTGTCAAGTCCATTAGCTCGTGGGCCAGCTAATGTTCAGCCTCGGGATATTGGAAGAAATGGCTCTGGCAACACTACAAGTTCACGTTCTGTGGCCACGTCACCTTTGGCCACTGATAAAAATGATGGCACAGTTGCTCTAGTTAAAACTGGATCTGAAATAGTTAAGAGTACCCCTGCAGGTGAATATCTTACTGCTGCTTTGAATGACTTTGATCCAGACCAATATGAAGGGCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTTGCTGCTGTCATCAAAGCAGGTGCCTCTAGGGAACATGAAATTCTTGCTGAGATTAAGGATTCTGTTTTCTCTTTTATCAGAAAGATGGAACCTAAACGTGTGATGGACACCATGCTTGTTTCCCGTGTTAGGATTCTGTATATAAGATCTTTGCTTGCAAGATCCCCAGAGTTGCAATCAATTAAGGTTTTGCCAGTGGATTGTTTTCTTGAGAAGAATAATACTGGGCGCAGTAGAAGTTCCAGCAGAGGAAGTAGTCCTGGTAGGTCTCCTGTGCTATATGTTGACGAGCAGATCCATGGATTTAAAGTGAATCTAAAGCCAGAAAAGAAATCAAAATTTTCATCTGTTGTGTTGAAGATACGTGGGATTGATGAGGATATCTGGAGACAGCAGGTAACTGGTGGAAAGCTTAGGGAAATTACCGAGGAGGCCAAAAGTTTTGCAATGGGGAACAAAGCTCTTGCTGCACTCTTTGTACATACACCTGCTGGTGAGTTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAATTTTGAATTTCTATCAGTAACTGGGGATGATGCATCGGGAGGCTCAACTGGTCAGTTGGAACTTCTTTCAACTGCAATTATGGATGGTTGGATGGCTGGCCTTGGTGCGGCTCTTCCTCCCCATACTGATGCCCTTGGCCAGCTATTGTTTGAATATTCAAAACGGGTCTATACTTCTCAACTACAACACTTGAAGAATCGCTTCGATGTCTTGGCGCATTGCCTCATAGTTCTGCCTCAAGGCCCCAGTTTCATGCCGCAAGAAGACATATCTACCTTCGTCTCGGCCAGCGATATTGCTGGTACCTTGGCAACAGAGGAGGCTGAAGATGCAGCACAAGTAGCTAAACTGCGTTCAGCTCTAGAATCAGTTGATCATAAAAGAAGAAAGATTCTGCAACAAATTAAAAGTGATATAGCTTTGTTAACATTAGAAAATGGTGGCTCCCCTATTCAAAATCCTTCTACTGCAGCTGAAGATGCAAGATTAGCATCTCTTATTTCGCTTGATAGCATATTAAAGCAAATCAAGGATATAACAAGACTTTCTTCTGTGAACATCTTGAGCAAAAGTAAGAAAAAGAGTATGCTTGCGTCTCTTGATGAATTAAAAGAACAGATGCCTTCACTTCTCCAAATTGATCATCCATGTGCTCAGAGGCACATTGCAGATGCCCGCTACATGGTTGAGTCAATTCCTGAAGAGGATGACCCCATTCAAGATATATCTCATGGTCAGAAGTCATCAACAGATCTGAGCTCTGGATCTGAAACCGACGTGGCACAATGGAATGTACTCCAATTTAATACCGGCTCGACATTACCCTTTATAATAAAATGTGGTGCTAACTCTAATTCGGAACTGGTCATTAAAGCTGATGCACGAGTTCAGGAACCTAAAGGTGGTGAAATTGTGAGGGTGGCCCCTAGACCCTCCGTTTTGGAAAATATGAACTTGGAGGAAATGAAACAAGTTTTTAATGAACTACCGGAGGCTCTAAGCTTGCTCGCTCTAGCTAGGACTGCAGATGGCACAAGGGCACGTTATTCTAGATTATATAGGACCTTGGCTACAAAGGTTCCATCGCTTAAGGATTTGGTCAGCGAGCTCGAAAAAGGGGGTGCACTCAAAGATGTTAGAACGTGA 4203 0.4202 MAEQRNRWSWDVAGFDPWKSSPPSQSPPPPLEHADRKPTAPLVRRYSISATSVLPQPRQSVALKLQRLKDKVKCSNGFSFCLVASACNDDVLARVSTFTSCVVVSTSSFSLRRMGRCNACGSRVNNHIRYFAQLAREDYVQLRQEANELQEYSNAKLDRVTRYLGVLAEKTRKLDHVALETEAKIAPLINEKRRLFNDLLTSKGNIRVFCRARPLFEDEGASVVEFPNDYTVSVNTGDESLSNAKKDFEFDRVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLSNLDSTSTSQYKFCVTVCELYNEQTRDLLLEAGKNTPKLSLGSPECFVELAQEKVDNPVEFSAVLKAALQTRENDLAKNNVSHLIVTVHIFYNNLITGENSYSKLYMVDLAGSEGLITEDDSGDRVTDLLHVMKSLSALGDVLSSLTSKKDIIPYENSVLTKLLADSLGGSSKTLMIVNVCPSVSNLSETLSSLNFSARARNSMLSLGNRDTIKKWRDVANDARKELYEKEKEINDLKQEALELKQTLKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHVLLSDKHNIEKEQNTQLRNQVAQLLHLEQDQKLRIQEQDSTIQSLQAKIRTLETQLNETIKAQSSSISVSEPESADLSNSKFTGDGIDSSAVTRKLEEELRKRDALIERLHEENEKLFDRLTQKASTAGSPKDFSNTWDTSGSLKFMPYFQLSSPLARGPANVQPRDIGRNGSGNTTSSRSVATSPLATDKNDGTVALVKTGSEIVKSTPAGEYLTAALNDFDPDQYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIKDSVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVDCFLEKNNTGRSRSSSRGSSPGRSPVLYVDEQIHGFKVNLKPEKKSKFSSVVLKIRGIDEDIWRQQVTGGKLREITEEAKSFAMGNKALAALFVHTPAGELQRQIRSWLAENFEFLSVTGDDASGGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKNRFDVLAHCLIVLPQGPSFMPQEDISTFVSASDIAGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQIKSDIALLTLENGGSPIQNPSTAAEDARLASLISLDSILKQIKDITRLSSVNILSKSKKKSMLASLDELKEQMPSLLQIDHPCAQRHIADARYMVESIPEEDDPIQDISHGQKSSTDLSSGSETDVAQWNVLQFNTGSTLPFIIKCGANSNSELVIKADARVQEPKGGEIVRVAPRPSVLENMNLEEMKQVFNELPEALSLLALARTADGTRARYSRLYRTLATKVPSLKDLVSELEKGGALKDVRT 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02106 1400 Coils Coil 689 712 - -
Vimu11g02106 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 563 IPR027417 -
Vimu11g02106 1400 Coils Coil 631 658 - -
Vimu11g02106 1400 MobiDBLite consensus disorder prediction 21 35 - -
Vimu11g02106 1400 Coils Coil 132 152 - -
Vimu11g02106 1400 ProSiteProfiles Kinesin motor domain profile. 205 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02106 1400 FunFam kinesin-like protein KIN-14B isoform X1 152 520 - -
Vimu11g02106 1400 SMART kinesin_4 203 527 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02106 1400 MobiDBLite consensus disorder prediction 657 682 - -
Vimu11g02106 1400 Pfam Kinesin motor domain 211 518 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02106 1400 ProSitePatterns Kinesin motor domain signature. 419 430 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu11g02106 1400 MobiDBLite consensus disorder prediction 753 783 - -
Vimu11g02106 1400 PRINTS Kinesin heavy chain signature 277 298 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02106 1400 PRINTS Kinesin heavy chain signature 420 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02106 1400 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02106 1400 MobiDBLite consensus disorder prediction 1 38 - -
Vimu11g02106 1400 Gene3D Kinesin motor domain 150 519 IPR036961 -
Vimu11g02106 1400 Coils Coil 529 570 - -
Vimu11g02106 1400 MobiDBLite consensus disorder prediction 764 783 - -
Vimu11g02106 1400 PANTHER KINESIN-LIKE PROTEIN KLP-3 957 1346 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02106 Vimu-Chr11 35152584 35191754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02106 192 517 Calmodulin-binding Proteins AT5G65930 37.870 4.57e-51 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02106 - - gmx:100796816 2115.89