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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu11g02093
ATGAGCTGGTATGGTCTCCTCCTCCTCCTTCCAAGAATAACCACCACTCAAAGATATACCAATTTTGAATTACACCACCTTCTTCTCTCTTATCCCCGCTGCTCCAATCCACCACCTAACGCCCTCATCAGAAGGAAAAATGAGATGGAGAAAGTAGAGAAAAAGGGAAAAGAAACCAAAGAAAAGAAATGGACGCGGAAACTGGAGTTACCGTCGATAATGGGGAACCCGAAGAAAGAGGTTGCATTCGACGACGACATATTGGCGTCACCGAGGGATGTATTTGGGGTGGCCGTTTCGGGGACGGATTCGGACAGCACGGGGAGCAGCAACTACAATGGGCTTGGATCGCCCGGGGTGGTCTCAAATCGGTGCCTGAGAGACCCGCAGAACCAGCAATGGAAGACGATGATCGACGTGTTGAGGTTCAAGTCCGTTAGAAGATTCTCGACTATTCCTCTGCTTGGGGCGAGTTACGAGATCTCGCGCCGGAGCCTGAGGAACAAGTTGGCTCGTATTCGACCTGCCAATGACGACGATGATTTGGATTCTTGTATTGACATTGACGGCATTGCCACCAAGCCTTCTTGGAGAAACTTCAATTACGCTGACCTCGTTGCTGCAACCGACGATTTCAACCCTGGGAACATGATCGGAAAAGGTGGTCATGCTGAAGTCTACAAAGGATGCTTACCTGATGGTCGAGTTGTAGCAGTTAAGAGGCTAATGAGGAATGAAAAGGACATCGAGGATACTGTTGGTGATTTCTTGTCAGAGCTTGGAATCATTGCTCACATTAACCACCCAAATGCAACACGCTTGATAGGGTTTGGGATTGACCAAGGTCTCTATTTTGTTCTACAATTGGCCCCACATGGCAGCCTTGCCTCTATGCTGTTTGGTGCAGTTCTGCCTCTACTCCCACTTCTCATTTCATCTCTTCTACTTTCAAGCATAGACAGACTCCCTATGAATAGTGTTAAGGTTACATGGCTAATAAAAGTGACACGTAATATTTCAGGACCTGAATGTCTGGAGTGGAATATAAGGTTTAAAGTGGCTGTTGGGGTTGCAAAAGGATTACAGTATCTCCACCACGATTGCCCGAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATATTACTCAACAACGATGATGAAGCTGAGATATCAGACTTTGGATTGGCAAAGTGGCTCCCAGATAAGTGGGCTCACCATGTTGTCTTCCCAATAGAAGGCACATTTGGATATTTAGCTCCGGAGTACTTTATGCATGGAATAGTTGATGAGAAGACTGATGTTTTTGCATTTGGGGTTTTGTTACTCGAGCTTATAACAGGGCGTCGAGCAGTTGATTCAAATAGCAGGGAAAGTCTTGTGATCTGGGCCAAACCACTTCTGGATGCAAAGCTGGTCGAAGAATTGCTAGACCCCAGATTAGGAGCTAATTATGATCTGGCCGAAATGAAGTGTTGCATGGCAACGGCTTCCTTGTGCATCCATCACATGTCCTCTAAGCGGCCATACATGGATCAGGTTGTGCAGCTACTGAAAGGAGAAGAGGTGCCAGTAGAACTGAATCACAACTCACCTACTCCAAGATCACTCTTGATAGATGCATGTGACCTGGAAGATTACACTTGCTCTAACTATTTGAACGACCTGAATCGCCACAGGCAATTACTGATGGAGTGA
1701
0.4633
MSWYGLLLLLPRITTTQRYTNFELHHLLLSYPRCSNPPPNALIRRKNEMEKVEKKGKETKEKKWTRKLELPSIMGNPKKEVAFDDDILASPRDVFGVAVSGTDSDSTGSSNYNGLGSPGVVSNRCLRDPQNQQWKTMIDVLRFKSVRRFSTIPLLGASYEISRRSLRNKLARIRPANDDDDLDSCIDIDGIATKPSWRNFNYADLVAATDDFNPGNMIGKGGHAEVYKGCLPDGRVVAVKRLMRNEKDIEDTVGDFLSELGIIAHINHPNATRLIGFGIDQGLYFVLQLAPHGSLASMLFGAVLPLLPLLISSLLLSSIDRLPMNSVKVTWLIKVTRNISGPECLEWNIRFKVAVGVAKGLQYLHHDCPRRIIHRDIKASNILLNNDDEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDAKLVEELLDPRLGANYDLAEMKCCMATASLCIHHMSSKRPYMDQVVQLLKGEEVPVELNHNSPTPRSLLIDACDLEDYTCSNYLNDLNRHRQLLME
566
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu11g02093
566
ProSitePatterns
Protein kinases ATP-binding region signature.
218
240
IPR017441
GO:0005524
Vimu11g02093
566
SMART
serkin_6
212
492
IPR000719
GO:0004672|GO:0005524|GO:0006468
Vimu11g02093
566
Gene3D
Phosphorylase Kinase; domain 1
186
287
-
-
Vimu11g02093
566
FunFam
Receptor-like cytosolic serine/threonine-protein kinase RBK1
187
289
-
-
Vimu11g02093
566
Gene3D
Transferase(Phosphotransferase) domain 1
331
531
-
-
Vimu11g02093
566
SUPERFAMILY
Protein kinase-like (PK-like)
196
535
IPR011009
-
Vimu11g02093
566
ProSitePatterns
Serine/Threonine protein kinases active-site signature.
372
384
IPR008271
GO:0004672|GO:0006468
Vimu11g02093
566
FunFam
receptor-like cytosolic serine/threonine-protein kinase RBK2
335
533
-
-
Vimu11g02093
566
Pfam
Protein tyrosine and serine/threonine kinase
215
517
IPR001245
GO:0004672|GO:0006468
Vimu11g02093
566
ProSiteProfiles
Protein kinase domain profile.
212
524
IPR000719
GO:0004672|GO:0005524|GO:0006468
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu11g02093
Vimu-Chr11
34865755
34869196
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu11g02093
172
542
Trihelix Transcription Factor Family
AT5G38560
36.053
1.63e-63
219
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
PK
RLK-Pelle_RLCK-VI
Vimu11g02093
PK_Tyr_Ser-Thr
3.6e-35
CL0016
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu11g02093
-
-
gmx:100794225
745.347
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