Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02023 ATGGGAGATGTGGCTAAGGACCTTACAGCTGGAACTATTGGAGGGGCAGCACAGTTGATATGTGGACACCCCTTTGACACTATCAAGGTCAAGCTCCAAAGCCAGCCTGTACCACTCCCCGGTCAGCTTCCCAAGTATTCAGGTGCATTTGATGCTGTCAAGCAGACAATAGCATCAGAAGGGCCAAGGGGTTTATACAAAGGTATGGGTGTTCCTCTTGCTACAGTAGCAGCTTTCAATGCTGTCCTGTTTTCAGTGAGGGGACAGATGGAAACATTAGTGAGGTCCAATCCTGGTGCTCCCCTCACAGTGAATCAGCAAGTTGTCTGTGGAGCTGGAGCTGGAGTTGCTGTTTCCATTCTTGCATGCCCAACTGAATTGATCAAATGCAGGTTGCAAGCTCAGAGTGCGCTTGCCGGCTCTGAAACAGCTACTGTGGCTGTTAAGTATGGAGGGCCCATGGATGTGGCCAGGCATGTTCTCAGATCAGAAGGGGGAATAAGAGGTCTTTTCAAGGGCCTGGTTCCCACAATGGCTCGAGAGATACCAGGAAATGCTATAATGTTTGGTGTATACGAAGCATTAAAGCGAAAGTTTGCAGGAGGAACTGATACTTCTGGCCTAAGTAGAGGTTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCTTTCTGGTTCATTGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTTGATGATTACAGAAACCCAAAATTTTCTGGATCATTTGATGCATTCAGAAAGATTCAAGCTTCACAGGGCTTCAAAGGCTTGTATAAGGGTTTTGGTCCTGCTATGGCCCGAAGTATTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGCATGA 894 0.4709 MGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPVPLPGQLPKYSGAFDAVKQTIASEGPRGLYKGMGVPLATVAAFNAVLFSVRGQMETLVRSNPGAPLTVNQQVVCGAGAGVAVSILACPTELIKCRLQAQSALAGSETATVAVKYGGPMDVARHVLRSEGGIRGLFKGLVPTMAREIPGNAIMFGVYEALKRKFAGGTDTSGLSRGSLIVAGGLAGASFWFIVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIQASQGFKGLYKGFGPAMARSIPANAACFLAYEMTRSALA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02023 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Vimu11g02023 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Vimu11g02023 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Vimu11g02023 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Vimu11g02023 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Vimu11g02023 297 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Vimu11g02023 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Vimu11g02023 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Vimu11g02023 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Vimu11g02023 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02023 Vimu-Chr11 32784269 32785546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02023 22 296 Antiporters AT1G79900 32.374 3.83e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02023 K15109 - gmx:100791908 552.747