Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02008 ATGGATTCCTTACCAAGAACGCATCTGTTGGGTTTGGGTTGGGAGCTAGGTTTGGTCGTAACTCATCCCCTCTCACACCGCCTCAAAATCTCCCTCACCTTCAATTCTCTCTCTTCTATTCTTCAGAACAACACACACTCTCCCACTTCCTCTAATTTACCACACCACACTTCTCTTCTTCAAGACACTACCTTCAAGCTGGCGTTCCAAAACCAAGCCACCACTGTCCGAGAAATCAAGCCCAAGAACCGCAGAATCATGGGTTCTGGAGGCCCTGATGACGAGGACAACCGGTGGCCGCCGTGGCTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGCTGCACGCTGATTCGCACAAGAGCGAGTGCAACATGTACTGTTTGGATTGTATGAACGGCGCACTCTGCTCCCTCTGCCTCGCTTACCACAAGGATCACCGTGCTATTCAGATAAGAAGGTCCTCATACCATGATGTGATTAGGGTGAACGAGATTCAGAAGGTGTTGGACATTACAGGGGTCCAAACCTACATTATCAACAGCGCAAGGGTTGTTTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGTAAAGGAGTCACTAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTTGATTCATACCGTTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACTTCAAGGAACTTCGAGAAGAAGAAAAAGTCAGCAACAATGGCATCAGATTCAGAGGATTCATACAGCAGCAATAGCAGCCATGGAAAGAACAACAGCAACAAGGTTCAGAGTTTCACACCGTCCACGCCACCACCGACTTCGGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAGTGATAGAATACTAG 906 0.4834 MDSLPRTHLLGLGWELGLVVTHPLSHRLKISLTFNSLSSILQNNTHSPTSSNLPHHTSLLQDTTFKLAFQNQATTVREIKPKNRRIMGSGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFEKKKKSATMASDSEDSYSSNSSHGKNNSNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02008 301 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 93 294 - -
Vimu11g02008 301 MobiDBLite consensus disorder prediction 235 301 - -
Vimu11g02008 301 MobiDBLite consensus disorder prediction 244 278 - -
Vimu11g02008 301 Pfam PLATZ transcription factor 155 226 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02008 Vimu-Chr11 32051753 32053774 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu11g02008 PLATZ 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02008 - - pvu:PHAVU_003G2848001 471.855