Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01977 ATGAAGAAGGTTCCCAAGAACAGCTGCAAGTCTGCATCGCACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTGGATGACCTGCAGGTGATGTTCCTCGATCTGCAGTTTGCTAGGAAGGAGAGTCGCACGGTTGATGCTGCAGTGCTTGAGGAGCAAGTTCATCAAATGCTTCGCGAGTGGAAGGCCGAGCTCAATGAGCCCTCGCCTGCATCTTCGTTGCAGCAAGGTTGCAGTCTTGGGTCATTCTCCACCGATATCTGTCGGCTATTGCAGCTTTGTGATGAGGAAGATGATGCCTCTAGTCCGTTAGCTGCTCCTAAGCCTGAACCAAATGATCAGACACTACAGGCTGAGGGTAAGGTTGTGTTCCAAGAGGTGAGTGACTTTTATTTTTTGAGGATTTTTTTGGCAATAATCATTTTGCAGGTGATGGTTGAATGTGGGCAAAATCTTGTCAGTGGAGGGTTCTGGGGGCTTAGATCTCAGATTGACAGAGTCCCTCCTCTGGTGGTAGGATTTGATCTGTCAACAGTGGCAAGAATGATGGCTGGGGAGAAACAGGGCCAACAGCAATATGATTTTCCGTTGATTGATGAGTGCAAAAACTCCACCTCAAGTGTTCAAAACGCTGCAGCTAACAACCCAGATGGACATACTTTAGAATATCATCAGTTTGATTTGCATCAGGACTATGATCATGGCTTTTACACTGGTTTTAATGGTACAGGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTACCTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTACTGCAGTAGCTTTCATGCTGCCTTAGCTTTGAATGAAGGGCCGCCAGGCATGGCCCCAGTTCTACGACCTGGGGGAATTGGTTTGAAGGATAATTTACTTTTTGCTGCCCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAGTGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGGTACTTTTGATCTTTTAGTCCCTTTTCTTTGGTTAACCGAGCTCTTTGATCTGTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTCTTCTTTGATAAGCCACGTAGAGCATTTGAGAGTGGAAACAGAAAACAAAGGTCATTGCCTGATTATAGTGGACGTGGTTGGCATGAATCTAGAAAGCAAGTCATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAGTGGCACCTTTATGAATACGAGATTAGCAAGTGTGATGCATGTGCCTTGTACCGATTGGAACTGAAGCTTGTTGATGGTAAGAAGAACTCCAAGACAAAGTTAGCTAGTGATTCAGTCGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCCGAGTTTCCACATGACAACAAAAGGGCTGCCAAAGGCAGAACCAAAGTTAATTCAAAAGTTGGCATAGGTGGTGTCTATTCAGCTTCACACAGAGTGACTACACTGAATGGAGCGTATGAGTATGGGTTGGCTGCACCATATGACTATCTTGTTGAGAACATGGGCGACTACTATGGGACATGA 1659 0.4635 MKKVPKNSCKSASHRLFKDKAKNRVDDLQVMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGCSLGSFSTDICRLLQLCDEEDDASSPLAAPKPEPNDQTLQAEGKVVFQEVSDFYFLRIFLAIIILQVMVECGQNLVSGGFWGLRSQIDRVPPLVVGFDLSTVARMMAGEKQGQQQYDFPLIDECKNSTSSVQNAAANNPDGHTLEYHQFDLHQDYDHGFYTGFNGTGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPGTFDLLVPFLWLTELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKTKLASDSVADLQKQMGRLSAEFPHDNKRAAKGRTKVNSKVGIGGVYSASHRVTTLNGAYEYGLAAPYDYLVENMGDYYGT 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01977 552 PANTHER TRANSCRIPTION FACTOR VOZ1 1 547 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01977 Vimu-Chr11 30900477 30909177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01977 3 550 VOZ-9 Transcription Factor Family AT1G28520 63.214 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vimu11g01977 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01977 - - jre:109022006 783.482