Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01967 ATGCATGTTGCAGCTTCATATTTAGGCCTAAAAGACTTGTTACCACCATATTTGGATCCGAATCTCAGCAACAAAGAAATTATAACCGGTGTCAGCTTTGCCTCTGCTGGTTCTGGCTTTGATCCACTAACTCCAACTTTGGGTAATGTAATTTCAATACCAAAGCAATTGGAACATTTTAAAGAATACAAAAAGAGGTTGGAGGGTATGCTTGGTGAGCGGAAAACCGAATATCATATGAACAATGCTTTCTTTTTCATCAGCGCGGGTACAAATGACTACGTTATTAATTATTTTTCGGTGCCGATACGAAGAAATTATACTCCATTAACCTATGGACAGTTCTTGCTTCAGCATGTTAAAGATTTCATACAGAATTTATGGAAAGAAGGTGCAAGAAAAATAGCTTTGGTTGGACTACCTCCAATGGGGTGCTTACCGATCGTGATCACATTGAATTCCCATAATGTGTTTTTCGAGCGTGGTTGTGTAGACAAGTATTCAGCTGTTGCGAGACATTACAATATGATGCTTCAACATGAATTGTTCTTAATGCAACTAAACTTCTCCAATGTTCCTCTGGGTGCCAAAATCTCGTATATCGACATATATGAACCCTTGAACAACATGATCCATTGGCATGAAAATTTTGGTTTTGATGAAGTTGATCAAGGTTGCTGTGGAAGTGGTTACATCGAAACAACCTTTATGTGCAATGGGTTTTCATTCGTGTGCTCTGATCCATCAAAGTTTGTCTTCTGGGATTCAATACACCCTACGGAAAAGGCATACTTTCACTTATTTATGGTAGCTCGTCCCAACATCGATGCCCTAATTAACGCCTAG 846 0.3901 MHVAASYLGLKDLLPPYLDPNLSNKEIITGVSFASAGSGFDPLTPTLGNVISIPKQLEHFKEYKKRLEGMLGERKTEYHMNNAFFFISAGTNDYVINYFSVPIRRNYTPLTYGQFLLQHVKDFIQNLWKEGARKIALVGLPPMGCLPIVITLNSHNVFFERGCVDKYSAVARHYNMMLQHELFLMQLNFSNVPLGAKISYIDIYEPLNNMIHWHENFGFDEVDQGCCGSGYIETTFMCNGFSFVCSDPSKFVFWDSIHPTEKAYFHLFMVARPNIDALINA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01967 281 Gene3D SGNH hydrolase 2 273 IPR036514 -
Vimu11g01967 281 SUPERFAMILY SGNH hydrolase 81 266 - -
Vimu11g01967 281 Pfam GDSL-like Lipase/Acylhydrolase 10 267 IPR001087 GO:0016788
Vimu11g01967 281 CDD SGNH_plant_lipase_like 5 268 IPR035669 -
Vimu11g01967 281 PANTHER GDSL ESTERASE/LIPASE EXL3 4 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01967 Vimu-Chr11 30674681 30677385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01967 3 264 Pollen Coat Proteome AT1G75910 33.333 5.68e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01967 - - gmx:100804919 483.796