Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01955 GGTTATGCTAGAAAACATTTACGTCGCTTGAGAGGATTCACAAAACTGAGAACCCTAACTCAAGGTTTCTCTGTTCAAAAACAAGCTAGTACAACTATAACTCATCTTCATTCATGGACCAAGATACAGGCTGAGATTAGAGCTCGTCGAATATGTATGGTGACAGAAGACAGGCTCAGACGGAAGAAACTACATTCTCAACTAAAACTAGAGGCCAAGATTCATGACCTTGAGTGGAGGGCCAACTCTAGCCAAGGTCTAGGCAATTATGAACTTGGCAAAGCTAGTTGGAGTTGGAGCTGGAAAGACCGTTGGATTGCTGCACGCCCTTGGGAAAGCCGTGTACCCAGTGTTACCATTAGCCCCAGGAAAGATCAAAATAAGATGTCAAGCAAAGTTAAAAAGGATAAGAAATCATCAACATCAAAACAACCAGTTTCAGTTAAAACTCCTTCAGCTAATGATAAAGGAACTAAACCCTTGGGTAATCCCAAAGGAACTGCTAAAGCTAGAAGAAGATTGTCTTACCCTGCTACAGAGAAAAAAACAGTGCAAGAAGGAAAGCAATGA 570 0.4158 GYARKHLRRLRGFTKLRTLTQGFSVQKQASTTITHLHSWTKIQAEIRARRICMVTEDRLRRKKLHSQLKLEAKIHDLEWRANSSQGLGNYELGKASWSWSWKDRWIAARPWESRVPSVTISPRKDQNKMSSKVKKDKKSSTSKQPVSVKTPSANDKGTKPLGNPKGTAKARRRLSYPATEKKTVQEGKQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01955 189 MobiDBLite consensus disorder prediction 143 157 - -
Vimu11g01955 189 MobiDBLite consensus disorder prediction 118 189 - -
Vimu11g01955 189 MobiDBLite consensus disorder prediction 127 142 - -
Vimu11g01955 189 PANTHER IQ-DOMAIN 5-RELATED 3 177 - -
Vimu11g01955 189 MobiDBLite consensus disorder prediction 174 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01955 Vimu-Chr11 30418556 30421241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01955 3 178 IQD Protein Family AT2G33990 39.070 7.45e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01955 - - gmx:100800675 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01955 11 30418556 30421241 Vimu11g01955 11 30418556 30421241 ECH
Vimu2g00733 2 4464508 4467530 Vimu11g01955 11 30418556 30421241 ECH