Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01920 ATGAGTACTTTTTGGTGTTTGGCTCATAAGCCTGAAAAGGTAAGGTGGGATGACCTAGAAGCCTCAAGGCATAATAGGGTTTCACCTTGGGAGATTGAGCCATCTGGTTCTACATCTACTGCAAATAAATTGATATCAGCTGGTTTGAAGAGGACCAAGATTGGATTGCCTTCAACCAAGCTAGATTTTCAAGTTTCCGCTGTTCTACCAATGACAGCTTTGTTGTTGAGTTGTTCCATTCTTTTGACAGATACAATTGGATCATCAGACTTTGGCGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATGTTGGATGTTAATACTACTTTTGATAGTATTAGTGGTCAGAATCACCAGCTATCCGATTTGAGGAGATGCTATCCTGGTTCAAACTGTCCTAGGATTGCTGCAACTGGAAATAGCATTGGAATTCCACAAGTGAGTTCCAATGTTTCCTGCAATGGCATAGGCTTTAGTGAATCTTTCATATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGGGCCCTGTCTGTTGATGAGGCTTGTGGAAATGGTCGCTTTGGACCTTTTGATGGTTACCACACACTGAGACCCAGCAATGGATGGTCTTCCCACTTGAGTAACAATTCTTCACATTTGCATCCACCTGTTCCATCTGGGCAAGTTTCATCTCCATCATCTGTGTTAGTGTTCCAGCAAGCAGTCAATCCAGTTTCAAACTCTGATTATAGCAGCAAAATCAGTCTGATGATGGAAGGTAAAGTCCGTCAACAACTTTCATACACTTCTGAAGCTAAAGGGGGAAAATTTGTATCAGTCCCTTATGAGCCTCTTCGTGGACTAGTTCAGAAAGGCACAAGTTCTTGTGGTGTCTCAAACTTGCATAATCAGTTAGAAAGTTCACGTTCACACGATTCTATTTCAGCACTTCGGGCTAGTCAAGAGTTGGTTCCCACTTGTAAAAGTCGATGCAGAGTCTTTGGCTTTTCATTAACTGAGGGCACTCCTGTTGCAAGTACAGAAGTAGCTGGCGCCAACCCATCTGCAGTCACATGTTCTGGACCTTCCTTTGCAAGACACGGTGAAGATGGTTTCCACCCAATGCATCCGCATAGGAGCAAGGCAGTGGGAAGTTATTGCACCAAAGTGTCAAAAGAGAATCATGAGCTACATAAATTCATGATAACTATGACTTGGAATAAAACTTCAGAAATTTTTAGCTCTCAAATTCATGATTTAAATTCTGAACTTCTTGATTCACCTTATCAGACTGAAGTGGAATGGGGTAAGAGGTGTCTTGATTTAGTAGTGTTTGATCGGATGACAGTGACATATCCTCTACAAAACGCATTTAAGAGTTCGAGCGCATTTAAGAAGAGTTCGAGTTATATGTGA 1425 0.4182 MSTFWCLAHKPEKVRWDDLEASRHNRVSPWEIEPSGSTSTANKLISAGLKRTKIGLPSTKLDFQVSAVLPMTALLLSCSILLTDTIGSSDFGESLRFQKVLQGQEMLDVNTTFDSISGQNHQLSDLRRCYPGSNCPRIAATGNSIGIPQVSSNVSCNGIGFSESFIFQKVLQGQEILPSQPYGRALSVDEACGNGRFGPFDGYHTLRPSNGWSSHLSNNSSHLHPPVPSGQVSSPSSVLVFQQAVNPVSNSDYSSKISLMMEGKVRQQLSYTSEAKGGKFVSVPYEPLRGLVQKGTSSCGVSNLHNQLESSRSHDSISALRASQELVPTCKSRCRVFGFSLTEGTPVASTEVAGANPSAVTCSGPSFARHGEDGFHPMHPHRSKAVGSYCTKVSKENHELHKFMITMTWNKTSEIFSSQIHDLNSELLDSPYQTEVEWGKRCLDLVVFDRMTVTYPLQNAFKSSSAFKKSSSYM 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01920 474 Gene3D - 2 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01920 Vimu-Chr11 29269090 29271820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01920 14 179 B3 DNA Binding Superfamily AT2G33860 37.278 7.95e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01920 K14486 - gmx:100808119 545.428