Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01863 ATGAAACCCATGCCAACATTCTTCTCCTTTCAAACCTCGTTACTTGTTTCTCTTGCCCTAGCGCTTGCCCTTACACCAATAACAACAACGACAAAGTTCCAATTCCAGAACGCCCTCTCCTTTTCCCCACTCGCCACTCTCTTTGTCACCCTCTTCGCTGTTTCCCTTAACTACTGGCTTGTCCCTGGCGGTTTTGCATGGAGAAACTATCGATTCCAACATCATCCCAACAACGAAAAACCGGACGCAAAACTTTATGGGCCTATGGGGTGGCCCATACTGGGCTCTCTGCCTCTAATGGGATCTCTGGCGCACGCCAAACTCGCTGCTTTAGCCGCCTCGTTAAACGCCAAGAGGATAATGGCGTTCAGCCTGGGACCCACTCCAGTTGTTATAAGCAGCCACCCCGAGACTGCCAGACAAATCTTATTCGGATCCTCCTTTTCGGATCGTCCCATAAAAGAATCCGCTCGCGCTCTCATGTTTGAGCGTGCCATTGGTTTCGCTCCTTCCGACACCTACTGGAGGCACCTTCGTAGGATTGCGGCGTTCCACATGTTCTCTCCGAGGAGGATTCAGGGTTTGGAGGGCGTCCGGCGGAGAGTGGCAGAGGACATGGTGAAGAGCGCGTGGAAGGAGATGGAGGAGAAAGGGGTGGTGGAAGTTCGGGGCATGCTTCAGGAAGGATCTCTGTTGAATATTTTGGAGAGTGTGTTTGGGAGTAATGATAAGAGTGAGGAGTTGGGTAATATGGTTAAGGAAGGGTACGAGTTGATTGCGAAGTTCAACTTGGAAGATTATTTTCCTCTCAAGTTTTTGGACTTTCATGGGGTGAAGAGAAGGTGCCACAAGTTGGCGGCTAAGGTCAGTAGTGTTGTGGGGCAAATTGTGGAGGAGCGAAAACGAGATGGGAGTTTTGTTGGGAAGAATGATTTTCTTAGCACTTTGTTATCCTTACCCAAAGAAGAAAGGTTGGATGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTATTTCGAGGAACAGACACAGTTGCAATACTCCTAGAATGGGTCATGGCCAGGATGGTTTTACACCAAGACGTACAAAAGAAAGCCCGCGAAGAAATCGACACGTGCATCAGCCAAAATCGTCACGTGCGAGACTCGGATATTGCGAACCTGCCTTACCTACAGTCCATAGTGAAAGAAGTTCTCCGGCTGCACCCACCGGGTCCACTACTCTCATGGGCCCGCCTCGCAGTCCAGGATGTCCACTTGGATAAAGTACTTGTGCCAGCTGGCACAACAGCCATGGTTAACATGTGGGCAATATCGCATGACTCGTCCATCTGGGAGGACCCATGGGCTTTCAAACCGGAGAGGTTCCTAACAGAAGACGTTTCCATCATGGGGTCCGACTTGAGGCTCGCCCCCTTCGGAGCAGGACGTAGGGTGTGTCCGGGCAGGGCCTTGGGCTTGGCCACGGCCCATCTCTGGCTCGCACAACTTCTCCGCCACTTCACATGGCTCCCGGCGCAACATGTTGATCTTTCGGAATGCCTTAAGCTTTCCATGGGAATGAAGACCCCTCTGCGATGCGTAGTGGTTCGTAGATAA 1599 0.5122 MKPMPTFFSFQTSLLVSLALALALTPITTTTKFQFQNALSFSPLATLFVTLFAVSLNYWLVPGGFAWRNYRFQHHPNNEKPDAKLYGPMGWPILGSLPLMGSLAHAKLAALAASLNAKRIMAFSLGPTPVVISSHPETARQILFGSSFSDRPIKESARALMFERAIGFAPSDTYWRHLRRIAAFHMFSPRRIQGLEGVRRRVAEDMVKSAWKEMEEKGVVEVRGMLQEGSLLNILESVFGSNDKSEELGNMVKEGYELIAKFNLEDYFPLKFLDFHGVKRRCHKLAAKVSSVVGQIVEERKRDGSFVGKNDFLSTLLSLPKEERLDDSDMVAILWEMVFRGTDTVAILLEWVMARMVLHQDVQKKAREEIDTCISQNRHVRDSDIANLPYLQSIVKEVLRLHPPGPLLSWARLAVQDVHLDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLTEDVSIMGSDLRLAPFGAGRRVCPGRALGLATAHLWLAQLLRHFTWLPAQHVDLSECLKLSMGMKTPLRCVVVRR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01863 532 Pfam Cytochrome P450 87 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 CDD CYP78 118 525 - -
Vimu11g01863 532 FunFam Cytochrome P450 78A5 77 532 - -
Vimu11g01863 532 PANTHER CYTOCHROME P450 78A7-RELATED 32 532 - -
Vimu11g01863 532 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 SUPERFAMILY Cytochrome P450 87 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 Gene3D Cytochrome P450 71 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Vimu11g01863 532 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 PRINTS E-class P450 group I signature 114 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01863 532 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01863 Vimu-Chr11 26409046 26411189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01863 24 532 Cytochrome P450 AT1G13710 51.810 1.43e-177 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01863 - - gmx:100817944 872.078