Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01858 ATGAAGGCAATAGTTCCTTCTTCTACACGTGCCGGCCTTTGCTCCCATCGAATCAGCCGCTGCGGCGGTCTTTCAGCCTGGCTGAAGGCATCACCAGCGTCACGGATCAACGGAGTCTTTGCCAACCACCGCATCCAGTGTCGCCATCGGAGGTGTCCCCAGTTGCCGGTATGCGTTGCCCAAGGCAGAACAGCTTCTTCTCTAATCATGATCGGCACAGGGCCAGCTACTAAGGCGAAGCTCCAAGTATCATCGCCAGTTGCCGCACCCAAGAGCGTGATCTTGAAAAGTCCAGCACTTGCGCAGTACATCCTTGATACGAGTGCATATCCCAAAGAGCACGAGCAGTTGAAGCAACTCCGAGAGACAACAGTGCAGAAATATGGTTTCAAGAGTGTGATGAATGTGGCTGAGGATGAGGCACAATTCCTTTCTATTCTTCTAAAAATCATGAAGGCTGAGAAAACACTAGAAATTGGAGTTTTCACGGGTTATTCCCTTCTTTCTACTGCTCTTGCTCTTCCTCCTCATGGCAAGATAATAGCAATTGACGTGGATAGAGAAGCATACGAGACCGGATTGCCCTTCATCCTGAAGGCAGGAGTGGAGGACAAAATTGACTTTATTCAAGCAGCAGATGCATTATCGGCCCTCAAAGATCTCGTTGAAGTAAGTGTTGTTTTGGCCTAA 690 0.4913 MKAIVPSSTRAGLCSHRISRCGGLSAWLKASPASRINGVFANHRIQCRHRRCPQLPVCVAQGRTASSLIMIGTGPATKAKLQVSSPVAAPKSVILKSPALAQYILDTSAYPKEHEQLKQLRETTVQKYGFKSVMNVAEDEAQFLSILLKIMKAEKTLEIGVFTGYSLLSTALALPPHGKIIAIDVDREAYETGLPFILKAGVEDKIDFIQAADALSALKDLVEVSVVLA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01858 229 CDD AdoMet_MTases 157 229 - -
Vimu11g01858 229 PANTHER O-METHYLTRANSFERASE-RELATED 90 222 - -
Vimu11g01858 229 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 93 229 IPR002935 GO:0008171
Vimu11g01858 229 Pfam O-methyltransferase 106 223 IPR002935 GO:0008171
Vimu11g01858 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 97 221 IPR029063 -
Vimu11g01858 229 Gene3D Vaccinia Virus protein VP39 86 225 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01858 Vimu-Chr11 26265595 26268245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01858 90 222 Monolignol Biosynthesis Gene Families AT1G67990 57.895 1.89e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01858 - - gmx:100813350 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01858 11 26265595 26268245 Vimu11g01858 11 26265595 26268245 ECH