Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01782 ATGGTGAATGAAGGTAGTTGTCTCCCCACGATGGATCTGCTACGGTCGGAGCCAATGCAAATGGCTCAATTGATCATTCCAATCGAATCAGCTCATCGAGCCATCTCTTACCTTGGCGATCTCGGCCTCTTCCAATTCAAAGATCTCAATGTAGATAAAAGTCCATTCCAGCGAACTTATGCTTCTCAGATTAAACGATGTGGAGAAATGGCGCGTAGGCTACGGTTGTTTAAGGACCAAATGTTGAAAGCAGGCGTGTCACCCTCAACGAGCTCAGCAAGAAAGGATAATGTTGATCTGGAAATTTTGGAGGTTAAACTTGAAGAACTTGAAGCTGACCTCCTTGAGATTAATGCAAATAATGAGAAGTTGAAACACACCTACAATGAGCTATCGGAGTATAAGCTTGTTCAAGAGAAGGTTGGTGAATTTTTCTCTTCAGCAAAAAATAATGCCGTAGCTCAACAGAGAAAGCTTGAAGTCCAGATAACTGTTGAAAGGTCTATTGACAGCCCATTACTATTGGAACAGGAGGAGACGTCAACAAAGCAAATTAAGCTGGGCTTTATCAGTGGACTTGTTTCAAGGGAAAAATCAGTTCCTTTCGAAAGAATTCTATTTCGTGCTACTAGGGGAAACGTGTTTCTCAAACAGGCTGTGGTTGATCATTCTGTTCTTGATCTTTCGTCAGAGGAGAAGGTTCATAAAAATGTATTTGTCGTTTTTTATTCTGGAGAGAGTGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGAGTAAACAACTTCAGACAATAACAGAGGTTTCAGGAAGACTTTCAGAATTGAAGACTACAATAGATGCAGGATTGCTTCACCGGAGCACTCTATTGCAGACAATGGCAGATCACTATGAGCAGTGGAGTCTTAAGCTGAAGAAGGAAAAATCAATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGCCAGATTCACAAAGTGTTGCAGCAGGCAACTGTCGAATGCAGTTCTCAAGTTGAGGCCATATTTCAGGTCTTAGAGACAAAGGAATCACCGCCTACCTACTTCTGCACAAACAAATTCACTTCTGCTTTTCAAGAAATTGTAGATGCCTATGGGTAA 1206 0.4063 MVNEGSCLPTMDLLRSEPMQMAQLIIPIESAHRAISYLGDLGLFQFKDLNVDKSPFQRTYASQIKRCGEMARRLRLFKDQMLKAGVSPSTSSARKDNVDLEILEVKLEELEADLLEINANNEKLKHTYNELSEYKLVQEKVGEFFSSAKNNAVAQQRKLEVQITVERSIDSPLLLEQEETSTKQIKLGFISGLVSREKSVPFERILFRATRGNVFLKQAVVDHSVLDLSSEEKVHKNVFVVFYSGESVKSKILKICDAFGANRYPFSDDLSKQLQTITEVSGRLSELKTTIDAGLLHRSTLLQTMADHYEQWSLKLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIHKVLQQATVECSSQVEAIFQVLETKESPPTYFCTNKFTSAFQEIVDAYG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01782 401 PANTHER VACUOLAR PROTON ATPASES 13 401 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vimu11g01782 401 Pfam V-type ATPase 116kDa subunit family 37 401 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vimu11g01782 401 Coils Coil 93 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01782 Vimu-Chr11 24118672 24127600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01782 11 401 Primary Pumps ATPases(2) AT4G39080 67.857 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01782 K02154 - gmx:100805813 676.011