Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01781 ATGGCGGAGCAGTACTTTGTATTCAAACGGGTATATAGGAAACCATCCTCTCCTGATTACACAGAACAGTGCCCTGGGGAATTGAGTGCATCGCCCCAAGGTTACATTGGATCGAACAATTTGTGCTTAGCTCATTCCGAGTTGTCCAGTGTTTTCTATGACAGAGTTCTGCTTTTGGCCTGGGGGTACAATAACACTATTATTCTCGTTGTTGGCATTTTTGTTTTTATCTGTGCAACTGTTGGTGTGTTACTGTTAATGGAAACTCTAAGTGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTCCAGAACAAATTTTACGAGGGAGATGGTTACAAGTTCTTTCCGTTTTCATTTACATTACTTACGGATGAGGATGATCTGTAA 393 0.4148 MAEQYFVFKRVYRKPSSPDYTEQCPGELSASPQGYIGSNNLCLAHSELSSVFYDRVLLLAWGYNNTIILVVGIFVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFTLLTDEDDL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01781 130 PANTHER VACUOLAR PROTON ATPASES 41 127 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vimu11g01781 130 Pfam V-type ATPase 116kDa subunit family 41 121 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01781 Vimu-Chr11 24115833 24117319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01781 41 129 Primary Pumps ATPases(2) AT4G39080 79.775 1.06e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01781 K02154 - gmx:100805813 174.866