Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01730 GAATTTCCTGCTGATGCTCGTCTTCTTGAGGGTGATCCTCTTATGGTTGATCAAGCAGGACTGACTGGGGAGTCACTTCCAGTTACTAAGCATCCAGGGCAAGAAGTGTTCTCTGGATCAACTTGTAAACAAGGAGAGATTGAAGCCGTTGTGATTGCCACTGTTGGTATGCTGGCTGAGGTCATAGTAATGTACCCAATTCAGCACCGCAAGTACAGGGATGGAATTGACAACCTGTTGGTTCTCTTGATTGGAGGTATTCCCATTGCTATGCCTACTGTGTTGCCTGTGACAATGGCCATCGGTTCTCACAAACTCTCTCAACAAGGTGCCATCACCAAGAGAATGACTGCCATTGAAGAAATGGCAGGCATGGATTGA 381 0.4698 EFPADARLLEGDPLMVDQAGLTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATVGMLAEVIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLPVTMAIGSHKLSQQGAITKRMTAIEEMAGMD 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01730 126 Pfam E1-E2 ATPase 3 55 - -
Vimu11g01730 126 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 123 IPR023298 -
Vimu11g01730 126 PANTHER CALCIUM-TRANSPORTING ATPASE 3 54 - -
Vimu11g01730 126 Gene3D - 54 125 - -
Vimu11g01730 126 Gene3D - 3 53 - -
Vimu11g01730 126 SUPERFAMILY Calcium ATPase, transduction domain A 2 54 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01730 Vimu-Chr11 22699724 22703237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01730 3 126 Primary Pumps ATPases AT2G18960 69.753 3.85e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01730 K01535 - gmx:100804422 220.32