Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01695 GAGCCTCCTTCTCATTCTCCTGCAAAAACCAAGCTAACTATAGTTTCATCAAAAACACTTTGTGTTGATTGTGATGAATGTGTTGTTTTCTCAAAGAAAAAGGTTCCAGTGAAAGATTCTAATGATCCCCCAATATCAACATTTCATCCTGAATGTGAAGACAAGATGAAATCTAGTGACACTGTTGAAGAACAGGGAAATTTCCATCTACATTCAGTGATCCAACTTGAGAGAGAAGATTCATCGAGTAAGATCATCGAACAAATATGCGAAGGTAACTTTAGGGAAAAGATTGAATGTGTTCTGAGAGTGCAGAGCAAGCAAGAAACGTTTGCATGGTATGAGGAATGTAGGGAATTGGTAAGGGTGAAAGCAGAAAACCTAGAAAAGGAGCATCCGAGATGCTTGGTTGATGGAAATGAACTACTCAGATTTCATGGCACAACACTTGCATGTTCCCTTGCTTCAAATGCTTCCTCTTCTACCCTTTGCACTTTAGACCAATGTGGTGTCTGTCAAATTCTGAAGCATGGTTTTTACTCCAACCAAGAATTATTTCATGGTGCACTTGGGGTTTGCACCTCTTCTACCAGTGCAAAAGCTATTCATTCAATTTCCTTACCCAATAACAAATCTGTGAGGAGAAAATGTGTTATGCTTTGCAGAGTGATAGCTGGGAGAATCCATAATCCTCTACAAGAGATTGAAGAAATCACTGATACTGGGTTTGATTCTTTGGTAAAGAAAATGAGAGACCACTCAGAGATTGAAGAACTCGTTGTGTTAAATCCTAGAGCTGTGCTCCCTTGCTTTTTGGTAATCTACAATCTTTGA 834 0.3909 EPPSHSPAKTKLTIVSSKTLCVDCDECVVFSKKKVPVKDSNDPPISTFHPECEDKMKSSDTVEEQGNFHLHSVIQLEREDSSSKIIEQICEGNFREKIECVLRVQSKQETFAWYEECRELVRVKAENLEKEHPRCLVDGNELLRFHGTTLACSLASNASSSTLCTLDQCGVCQILKHGFYSNQELFHGALGVCTSSTSAKAIHSISLPNNKSVRRKCVMLCRVIAGRIHNPLQEIEEITDTGFDSLVKKMRDHSEIEELVVLNPRAVLPCFLVIYNL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01695 277 SUPERFAMILY ADP-ribosylation 73 276 - -
Vimu11g01695 277 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 47 275 - -
Vimu11g01695 277 Gene3D - 65 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01695 Vimu-Chr11 21950206 21951313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01695 71 274 C2H2 Transcription Factor Family AT5G54630 46.575 1.00e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01695 - - vum:124838708 486.108