Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01672 TATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTCATCTGGTCAGGATTGCGAGGGGCAGTTGCCTTGGCACTTTCATTATCACGATCGAGTGGAAATTCAATTGAGTTGACTCCAGAGACAGGAACACTGTTTGTTTTCTTCACTGGTGGAACTGTGTTTTTAACACTTATAGTAAATGGGTCAACCACACAACTCATGTTACGTTACCTCGGCATGGATAGTTTATCAGCAGCTAAGAGACGTATCCTTGACTTTACAAAGCATGAAATGTTGGACAAGGCATTGGAGGCTTTCAGTGACCTTGGAGATGATGAGGAACTTGGGCCTGCTGACTGGCCCACAGTAAAGAGATACATCTCTTGCTTAAAGGATATTGAAGGTGAACGTGTTCACCCTCATGGTGCAACTGAAAATGATAGTCAACTAGATCCTATGAACTTGAAAGATATACGAGTACGACTACTGAATGGTGTACAAGCTGCTTACTGGGAGATGCTTGAAGAAGGAAGGATTTCTCAAACAACAGCTAATGTCCTAATGTTATCCGTAGAGGAAGCCATAGATTTGGCTTCATCTGAGTCTCTATGCGACTGGAAAGGTTTAAAATCTAACGTCCACTTCCCAAGTTACTACAAGTTTCTACAGTCCAATATGTTCCCACCGAAGTTAATGACATACTTCACTGTACAAAGGTTGGAATCTGCGTGTTATATTTGTGCTGCATTTCTTCGTGCTCACAGAATTGCTCGACAACAATTACATGACTTCATAGGTGACAGCGATATTGCTTCTGCTGTCATCAATGAAAGTGTTGTAGAAGGAGAAGAAGCACGGAAGTTCCTAGAAGATGTTAATGTGACATACCCTCAGGTTCTGCGTGTTGTAAAAACAAGGCAAGTTACATATGCAGTGCTACAGAATTTAATTGAATATGTTCAAAACCTTGAGAAGACTGGGATATTGGAAGAGAAAGAGATGCTACATCTCCATGATGCTGTCCAGACTGATTTGAAGAAATTACTTAGAAATCCTCCTCTGGTTAAGCTTCCTAAAATAAGTAGCATACATCCTATGTTGGGTGCTCTCCCATCTTCGGTTCGTGAATCACTTGCCAACTGTACCAAGGAAATGATGAAATTCCGTGGTGTGACACTTTACAAGGAAGGTGCAAAGTCAAATGGTATTTGGTTAATTTGTAATGGAGTAGTGAAGTGGGAAAGCAAGATGACAACAACCAAACACTCATTTTATCCTACTTTTACTCATGGGAGTACATTGGGTCTTTATGAAGTGCTGACCGGAAGACCATATATCTGTGATGTCATCACAGATTCTGTAGTATTCTGCATTTTTCTTGAAGCTGGCAAGATAATATCATGTCTCAAATCAGATCCTTCAACAGAAAACTTCCTGTGGGAGGAAAGTGCTATTTTCCTTTCCAAATTATTGGTTCCTCAGATATTTGGGAAACTGGCTATGCAAGATTTAAGAGCTCTTATTGCAGATCCAGAGAGATCTCGGATGACCATATTCATAAGAGGGGAAACAATAGAAATCCCTCATCATTCAGTTGCCCTCTTACTAGAAGGATATGTCAAAACTCAAGGTCGTCAAGAACTCATAACAGCACCAGCAGCGCTGCTTCCTTCATCGGGGAATCTAAGCTTCCAAAATTTGGCAGGATCAGGTGAACAACTTGGAAAGCTTGATGGGGAGCCTAGAGAAGAGCTTGTTATTCAAAGGTTAGAGATTGCAAAAGCTGATTTGCAACAACAGATTGAAAAGGAGGTTAGAAGAAATGCAATTCTACAATTGCAAGTCGAGAAGGATTTAACAGCTACACTGGAAGTGCAAGATGAGAAGTGGCGACTTGCAATGCATGAGGAGATAGGTTCCAAGGGAGCTAGTTTTACTCATCAAGGATCTATTTATCTAGTTGAAACTACAGCAAGGGTAATTCTTTTTAACATACCGGCATCTGAGGCCGATGCTTCTCTTGTGAGAAGGTCAAGTTCACTGTTATTGCATGCCGGGGATCATCCTCATAGATCTTTCCGTCGAAAACATAGTGGTCTTATGAGTTGGCCTGAACATTTCTACAAACACAAGAACAATGAGCAGATATCTGAAGGGATTGAGCGACAAACCTATAGTTTGTCTGCAAGGGCAGTGCATCTGAGCATTTATGGGAGTATGGTGCACATCCCTCCGCGGAGTAGAAGTTTGTCAAGCCATCATGGTAGAGAACCTCATAGCCTGTCCTATCCAACCATGAAGTCCCACCGTCCACTTGTCACAGTGAAATCAGAAGGAGCTGCAACTGCTAAGAAGGTCCATGAGGTCACAAGACAAGTTACAAATCCACCTTCACAAAGCACAGAACAAAGAAAACATCATCATGGTCATGGAGAAAATTCAAGTGATGATGAAGATGTTATTGTGAGGATTGATTCACCGAGCACTCTATCTTTTCGCTAG 2487 0.4142 YFGYGLDWKEAIILIWSGLRGAVALALSLSRSSGNSIELTPETGTLFVFFTGGTVFLTLIVNGSTTQLMLRYLGMDSLSAAKRRILDFTKHEMLDKALEAFSDLGDDEELGPADWPTVKRYISCLKDIEGERVHPHGATENDSQLDPMNLKDIRVRLLNGVQAAYWEMLEEGRISQTTANVLMLSVEEAIDLASSESLCDWKGLKSNVHFPSYYKFLQSNMFPPKLMTYFTVQRLESACYICAAFLRAHRIARQQLHDFIGDSDIASAVINESVVEGEEARKFLEDVNVTYPQVLRVVKTRQVTYAVLQNLIEYVQNLEKTGILEEKEMLHLHDAVQTDLKKLLRNPPLVKLPKISSIHPMLGALPSSVRESLANCTKEMMKFRGVTLYKEGAKSNGIWLICNGVVKWESKMTTTKHSFYPTFTHGSTLGLYEVLTGRPYICDVITDSVVFCIFLEAGKIISCLKSDPSTENFLWEESAIFLSKLLVPQIFGKLAMQDLRALIADPERSRMTIFIRGETIEIPHHSVALLLEGYVKTQGRQELITAPAALLPSSGNLSFQNLAGSGEQLGKLDGEPREELVIQRLEIAKADLQQQIEKEVRRNAILQLQVEKDLTATLEVQDEKWRLAMHEEIGSKGASFTHQGSIYLVETTARVILFNIPASEADASLVRRSSSLLLHAGDHPHRSFRRKHSGLMSWPEHFYKHKNNEQISEGIERQTYSLSARAVHLSIYGSMVHIPPRSRSLSSHHGREPHSLSYPTMKSHRPLVTVKSEGAATAKKVHEVTRQVTNPPSQSTEQRKHHHGHGENSSDDEDVIVRIDSPSTLSFR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01672 828 PANTHER SODIUM/HYDROGEN EXCHANGER 4 435 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vimu11g01672 828 MobiDBLite consensus disorder prediction 796 818 - -
Vimu11g01672 828 CDD CAP_ED 361 453 IPR000595 -
Vimu11g01672 828 Coils Coil 582 609 - -
Vimu11g01672 828 ProSiteProfiles cAMP/cGMP binding motif profile. 361 456 IPR000595 -
Vimu11g01672 828 Gene3D Jelly Rolls 338 487 IPR014710 -
Vimu11g01672 828 MobiDBLite consensus disorder prediction 738 828 - -
Vimu11g01672 828 SUPERFAMILY cAMP-binding domain-like 359 475 IPR018490 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01672 2 828 Antiporters AT2G01980 53.325 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01672 K14726 - gmx:100789429 985.711