Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01650 ATGGTGCTGAAGGAAGATTTGGAGAAGAGTGGACGCTTTAATATAGTCTCAAAAGACAATGGTGTTCCAGTGGTGGCATTTTCTCTGACAGACCGAAGCCAATACGATGAGTACAAGATATCAGAGATGCTGCGGCACGGTTGGATAGTGCCAGCTTATCCAATGCCACCTGCTGCTCAACACATCAATGTGCTCCGTGTGGTGATCAGGGCTGAGTTTTCTTGCACCCTTGTTGAACGCCTTGTGTATGACATATACAATGTGGTGCATGAGCTTGAGAAGATGCATAGCCCCACAATACCGAATAACTTTAAGGAAGAGAAGAAGATGTTAGTGAAGAGTGAAGTTAAGAAAAGTGCAATGGATGCAGAGAAGGAAGTGATTGTTGAAGAATCCAACAAGCGCAAGAAAATCATGGCTGCCTAA 426 0.4437 MVLKEDLEKSGRFNIVSKDNGVPVVAFSLTDRSQYDEYKISEMLRHGWIVPAYPMPPAAQHINVLRVVIRAEFSCTLVERLVYDIYNVVHELEKMHSPTIPNNFKEEKKMLVKSEVKKSAMDAEKEVIVEESNKRKKIMAA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01650 141 PANTHER GLUTAMATE DECARBOXYLASE 2 134 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vimu11g01650 141 FunFam Glutamate decarboxylase 10 96 - -
Vimu11g01650 141 Gene3D - 10 96 - -
Vimu11g01650 141 SUPERFAMILY PLP-dependent transferases 3 94 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01650 Vimu-Chr11 20550357 20550782 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01650 1 130 Calmodulin-binding Proteins AT1G65960 58.955 8.17e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01650 K01580 - gmx:100782330 225.328