Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01648 ATGGTGCTGAAGGAAAATATAGAGAAGAGTGGACGCTTTAACATGCTATCGAAAGACGATGGTGTTCCAGTGGTGGCATTTTCTCTGAAAGATAGAAGGCAGTATGATGAGTACAAAATATCAGAGATGTTGCGGCGGCACGGTTGGATAGTTCCAGCTTACCCAATGCCGCCTGCTGCTCAACACATCAATGTTCTCCGTGTGGTGATCAGGGCTGAGTTTTCACGTACCCTTGTTCAGCGCCTTGCGTTTGATATAGACAATGTGCTTCATGAGCTTGAAAAGGTGCATGGGCCCACAATGAGCAGTAACACTGAGGAAGTGAAGAAGTCCTTGGTTGATTCTGCAGTCAAGAAAAATGCCATGGATACACAGAAAGAAATGATTGCTCAAGAATCCAAAAAGCGTCAGAAAATCATGGCTGCCTAG 429 0.4522 MVLKENIEKSGRFNMLSKDDGVPVVAFSLKDRRQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLVQRLAFDIDNVLHELEKVHGPTMSSNTEEVKKSLVDSAVKKNAMDTQKEMIAQESKKRQKIMAA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01648 142 PANTHER GLUTAMATE DECARBOXYLASE 2 136 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vimu11g01648 142 FunFam Glutamate decarboxylase 10 97 - -
Vimu11g01648 142 Gene3D - 10 96 - -
Vimu11g01648 142 SUPERFAMILY PLP-dependent transferases 3 95 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01648 Vimu-Chr11 20540074 20540502 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01648 1 134 Calmodulin-binding Proteins AT5G17330 50.360 1.44e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01648 K01580 - gmx:100782330 222.631