Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01645 ATGCCTGAGGACTCCATGCCAAAGGAGGCTGCCTACCAGAACATTCACGATGAGTTGCAACTTGATGCCATTCCAAAGCTTAATTTGGCTTCCTTTGTCACCACTTCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAGAACTATGTTGACATGGACGAATATCCTATCACCACAGACCTTCACAATCGGTGTGTGAATATGATAGCACGTTTGTTCCATGCTGAAATTGGAGAAGATGAGAATGCTATTGGAGCAGGAACTGTTGGCTCATCAGAAGCAATAATGCTGGCAGGACTTGCATTCAAGAAGAAGTGGCAGAACAAGCGTAAGGCAGAAGGCAAGCCTTATGATAAGCCTAATTTGGTCACTGGCTCCAATGTACAAGTATGTTGGGAGAAATTTGCGAGATGGGAAACTCCTATTCATGTGGATGCTGCAAGTGGTGGTTTCATTGCTCCATTCCTATATCCAGAGCTGGAATGGGATTTCAGGCTGGCATTGGTGAAGAGCATAAATGTGAGTGGACACAAATATGGGCTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGGACAAAGGATGACTTACCAGAAGACCTTGGATACTTGAGCATAATGGAGAACTGCAGAGAAAACGCAATGGTACTGAAGGAAGATTTGGAGAAGAGTGGGCGCTTTAACATACTCTCAAAAGACAATGGTGTTCCAGTGGTGGCATTTTCTTTGAAAGACAGAAGCCAGTACGATGAGTACAAGATATCAGAGATGCTGCGGCGGCACGGTTGGATAGTTCCAGCTTATCCAATGCCACCTGCTGCTCAGCACATCAATGTGCTCCGTGTGGTGATCAGGGCCGAGTTTTCACGCACCCTTGCTGAACGCCTTGCCTTTGACATACACAATGTGCTGCATGAGCTTGAAAAGTTACCTCCCCCCACAATGATCAATAACACTGAGGAAGTGAACAAGGCCTTGGTTGATAATGGAGTCAAGAAAAATTCCATGGATACACAGAAGGAAATCATTGCTCAAGAATCCAACAAGCGTCAGAAAATCATGGCTGCCTAG 1083 0.4515 MPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARLFHAEIGEDENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARWETPIHVDAASGGFIAPFLYPELEWDFRLALVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLGYLSIMENCRENAMVLKEDLEKSGRFNILSKDNGVPVVAFSLKDRSQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLAFDIHNVLHELEKLPPPTMINNTEEVNKALVDNGVKKNSMDTQKEIIAQESNKRQKIMAA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01645 360 SUPERFAMILY PLP-dependent transferases 1 313 IPR015424 -
Vimu11g01645 360 PANTHER GLUTAMATE DECARBOXYLASE 1 142 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vimu11g01645 360 FunFam Glutamate decarboxylase 228 315 - -
Vimu11g01645 360 Gene3D - 143 227 IPR015421 GO:0003824
Vimu11g01645 360 Gene3D - 35 142 IPR015421 GO:0003824
Vimu11g01645 360 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 141 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vimu11g01645 360 Gene3D - 228 315 - -
Vimu11g01645 360 Gene3D - 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01645 Vimu-Chr11 20488129 20489904 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01645 142 348 Calmodulin-binding Proteins AT5G17330 58.800 1.68e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01645 K01580 - zju:107419654 417.157