Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01644 ATGATCTTTGTCCTCGTCTACTGCACCGCGGGCATTTCCGGGGGTCACATAAATCCTGCCATCACGTTCGGGTTGTTTCTTGCAAGGAAGGTGTCGCTGGTGAGAGCAATCGCGTACATAGTAGCTCAGAGCTTGGCAGCTATATCTAGCGCGAGGCTTGGAAAGGCATTTCAGAAGAGCTACTACAACAGGTACAATGGTGGCGTGAACTTGCTCTTTGATGGGTACAGTAAAGGCACTGGCTTGGGCGTTGAGATTATTGGCACCTTTGTTCTTGTTTACACCATCTTCTCCGCCACCGATCCTAAGAGAAAAGCCAGAGATTCCCATGTTTTGGCACCACTTCGAATTGGGTTCGCCGTGTTCGTGGTTCACTTGGCCACCATCCCCGTCACCGGCACTAGCGTTAAGGATTGA 417 0.5084 MIFVLVYCTAGISGGHINPAITFGLFLARKVSLVRAIAYIVAQSLAAISSARLGKAFQKSYYNRYNGGVNLLFDGYSKGTGLGVEIIGTFVLVYTIFSATDPKRKARDSHVLAPLRIGFAVFVVHLATIPVTGTSVKD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01644 138 Gene3D Glycerol uptake facilitator protein. 1 137 IPR023271 -
Vimu11g01644 138 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 136 IPR034294 -
Vimu11g01644 138 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g01644 138 PRINTS Major intrinsic protein family signature 84 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g01644 138 PRINTS Major intrinsic protein family signature 118 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g01644 138 ProSitePatterns MIP family signature. 16 24 IPR022357 -
Vimu11g01644 138 Pfam Major intrinsic protein 1 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g01644 138 SUPERFAMILY Aquaporin-like 2 135 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01644 Vimu-Chr11 20479435 20479989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01644 1 137 Major Intrinsic Protein MIP AT5G60660 77.698 2.52e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01644 K09872 - gmx:100785783 228.024