Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01630 ATGGTGGAGCAAAGACGTAGGTCTTCCTTGTTGTTGTCCGGTAACTATTCCCAGTCTTTGTCTTCGTTCCATCGTTCGGAGGGGTACTTGCCAAAGAAGAGGCTCGCGTTTCGTGTGTCGATAGTCAGAGGAAGCTCTCTTCAAGTTAGCAAGGAGAAGCTCGCGTTTTGTTTGTTGAAAGTCGGAGCGGTTCTCTTCGAGTTGGCAGAGTGTTCTTCTTCCAGTTCATTCGTCGAAGGAAGTGATGTCGTTTGGCTCCACCGGTGTGGGTCAACTTTACCTGATTCTGATTATTGTATTGCTGGCACAATTATCTCAGGGTCGTCTGTCCTAAGGGATACCGGACTCCTCCCTGACTCCATCCACGCGCCGCCGTACTCTGTGAGATCCTCCGTTGTCTCCGCCCTCTGCCTTTCATACCAAATGGCCAACAGAGTTCAAATTCCTAGCAACAACTCAGCACTCATTGCCATGATTGCAGATGAGGACACTGTAGTTGGGTTTCTGTTGGCTGGAGTGGGAAATGTTGACATACGTAGGAAGACAAATTACCTCATTGTGGATGCAAAAACAACTGTCAAACAAATTGAGGATGCATTCAAAGAATTTACAACAAGGGAGGATATTGCAATTGTGATGATTAGCCAATATGTTGCAAATATGATAAGGTTTTTGGTTGATAGTTATAACAAGCCTGTTCCTGCAATTCTCGAAATCCCTTCTAAAGACCATCCTTATGATCCGGCACATGATTCAGTTCTGTCACGAGTGAAGTATCTCTTTAATACCGAATCGGTTGCATCTGGTAGACGCTGA 816 0.4559 MVEQRRRSSLLLSGNYSQSLSSFHRSEGYLPKKRLAFRVSIVRGSSLQVSKEKLAFCLLKVGAVLFELAECSSSSSFVEGSDVVWLHRCGSTLPDSDYCIAGTIISGSSVLRDTGLLPDSIHAPPYSVRSSVVSALCLSYQMANRVQIPSNNSALIAMIADEDTVVGFLLAGVGNVDIRRKTNYLIVDAKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFNTESVASGRR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01630 271 Gene3D ATPase, V1 complex, subunit F 150 262 IPR036906 GO:0034220
Vimu11g01630 271 FunFam V-type proton ATPase subunit F 150 263 - -
Vimu11g01630 271 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 119 267 - -
Vimu11g01630 271 NCBIfam V-type ATPase subunit F 152 265 IPR005772 GO:0033180|GO:0046961|GO:1902600
Vimu11g01630 271 SUPERFAMILY AtpF-like 156 240 IPR036906 GO:0034220
Vimu11g01630 271 Pfam ATP synthase (F/14-kDa) subunit 156 257 IPR008218 GO:0034220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01630 Vimu-Chr11 20255251 20261927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01630 142 267 Primary Pumps ATPases(2) AT4G02620 85.714 1.36e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01630 K02151 - gmx:100780523 251.136