Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01621 ATGGCAATTCCCATGGAGATCCCTTTTCTTTCCATCTTATCCTATTCTCTCTTCTACCTCCTTCTCTTTCTCCTTTTCCAGCTTCTTCTCCAAGCCAGAAAGTTCCAGAACCTTCCACCAGGTCCACCCTCTCTCCCCATATTCGGCAACCTCCACCACCTCAAACGCCCCCTCCACCGCACCTTCAAAGCCCTTTCCGACAACTACGGCCACGTCATCTCCCTCTGGTTCGGATCACGCCTCGTCGTCGTCGTCTCCTCCCACTCCCTCTTCCAACACTGCTTCACCAAAAACGACATCGCCCTCGCCAACCGGCCCCGCTTCCTCTCCGGCAAATACATCTTCTACAACTACACCACCCTTGGATCCTCCCCGTACGGCCACCACTGGCGCAACCTCCGCCGCATCACCGCCCTCGAACTCCTCTCCACACACCGCATCAACACCTTCGCCGACATTCGAAGGGACGAAACGCACAGACTCATCCGGAAGCTCGCCGAGGACGCGTCGAGCCACTTCGCCGAAGTGGAACTCACTTCAAAGTTCTACGACATGACTTTCAACAACATAATGAGGATGATCTCAGGTAAGAGGTACTACGGCGACGACTGCGACATGGCCGATGTGGAAGAGGCCCGGCAGTTCAGGGCCATGGTTTCGGAGCTTCTGAAGCTGTCCGGCGCCAATAATAAGAACGATTTCATGCCCTTACTGAGGCTGTTTGATTTTGAAAACCTGGAGAAGAGGCTGAAGAAGATCAGTTCCAAAACTGACACCTTCTTGAATGGACTCCTGGAAGAACAGCGCAGCAAGAAGCAACGTGCAAATACCATGGTTGATCATCTCCTCAGTTTGCAGGAATCGCAACCTGACTATTACACTGACGAAATCATCAAAGGCCTTGCTTTGGGCATGCTGGTTGCTGGAACTGATTCATCAGCTGTAACTTTAGAGTGGGCAATATCTTGTGTGCTGAACCATCCAGAGGTGTTGAAGAGGACAAGAGATGAACTGGAAACACAAGTGGGACAAGAGCGTTTGTTAGAGGAGTCTGACTTATCAAAACTACCTTACCTTAAAAACATAATCTTTGAGACACTTAGGTTGTATACTCCTGCGCCATTGTTGTTGCCACACTCATCTTCAGAAGAGTGCATTATTGGGGGATTCAAAGTTCCAAGAGACTCTATAGTGCTGATAAATGCTTGGTCCATTCACAGGGACCCTGAAGTGTGGAGTGAAGCCACAAGTTTCAAGCCTGAAAGATATGAAAGTGAAGGTGAGTTGGAGAAGCTAATTGCGTTCGGAATGGGAAGAAGGGCTTGCCCAGGAGGAGCCTTGGCTATGCGTGCACTCTGCTTGACTTTGGGATTATTGATTCAATGCTTCGATTGGAAACTAGTTGGTGACAAACAGCTCGACATGAGAGAGGAAAATGGATTCACTTTGTCCCGGTTGATCCCACTAAAGGCCATGTGTAAAGCACGCCCAGTCATCAACAACCTTCTCGACTGA 1515 0.499 MAIPMEIPFLSILSYSLFYLLLFLLFQLLLQARKFQNLPPGPPSLPIFGNLHHLKRPLHRTFKALSDNYGHVISLWFGSRLVVVVSSHSLFQHCFTKNDIALANRPRFLSGKYIFYNYTTLGSSPYGHHWRNLRRITALELLSTHRINTFADIRRDETHRLIRKLAEDASSHFAEVELTSKFYDMTFNNIMRMISGKRYYGDDCDMADVEEARQFRAMVSELLKLSGANNKNDFMPLLRLFDFENLEKRLKKISSKTDTFLNGLLEEQRSKKQRANTMVDHLLSLQESQPDYYTDEIIKGLALGMLVAGTDSSAVTLEWAISCVLNHPEVLKRTRDELETQVGQERLLEESDLSKLPYLKNIIFETLRLYTPAPLLLPHSSSEECIIGGFKVPRDSIVLINAWSIHRDPEVWSEATSFKPERYESEGELEKLIAFGMGRRACPGGALAMRALCLTLGLLIQCFDWKLVGDKQLDMREENGFTLSRLIPLKAMCKARPVINNLLD 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01621 504 Gene3D Cytochrome P450 31 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 CDD CYP81 70 489 - -
Vimu11g01621 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vimu11g01621 504 PANTHER CYTOCHROME P450 82C3-RELATED 19 496 - -
Vimu11g01621 504 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 Pfam Cytochrome P450 39 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01621 504 FunFam Cytochrome P450 family protein 29 499 - -
Vimu11g01621 504 SUPERFAMILY Cytochrome P450 39 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01621 Vimu-Chr11 20116904 20118505 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01621 13 499 Cytochrome P450 AT4G37370 51.429 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01621 K13260 - gmx:100784650 846.654