Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01605 ATGAGGCTCTTTATCCTCGTTTTCTTCCTCCGTTTCTGTGTCTTAACTCCAGCATATGATGCATATCCACTGTGGCTTGCCTCTGTGATGTGTGAAGTATGGTTTGCACTGTCATGGATACTTGACCAGTTCCCCAAATGGTTCCCCATAACTCGTGAAACTTACTTTAATTGCTTGTCCATGAGGTTTGAGCGTGAAGGGGAGCCAAACCTTCTCGCTTCAGTTGATGTCTATGTGAGTATTATGGACCCTTTGAAAGAGCCTTCCATTATAGCAGCAAACACTGTTCTTTCAATCCTGGCTGTCGATTACCCGGTCGACAAGGTTGTGTCTATGCTCCTTTTCGATGCACTTTCAGAAACTTCTAAGTTTGCACGAAGATGGGTTCCTTTTTGCAAGAAGTATAGCATAGAGCCAAGGGCACCTGAGTTCTATTTTTCTCAGAAGATTGATTACTTGAAAGATAATGTGCAACCTACCTTTGTGAAGGAACGAAGGGCCATGAAGGTAGGCCATAAAGATAGGACAAAAAGGATGGAATCCCTTAGCCTAGGAACAGTACTCGTGATCATCCAGGAATGGTTTAGGTTTGACTATGATTCAAATCCTCTAGCTAGAAGTGGCAGAGCACTAGACGTAGAAGGCAAGGAACTGCCACGACTGGTGTATATTTCACGTGAAAAGCGTCTTGGCTATAACCACCACAAGAAAGTCGGTGCTATGAATGCTTTGGTTCGAGTTTCAACTGTGCTTTCAAATGCACCTTTCATGCTGAATCTGGATTGTGACCATTACATAAACAATAGCAAGGCTATAAGAGAGGCCATGTGTTTTTTAATGGACCCCAGATAG 852 0.4331 MRLFILVFFLRFCVLTPAYDAYPLWLASVMCEVWFALSWILDQFPKWFPITRETYFNCLSMRFEREGEPNLLASVDVYVSIMDPLKEPSIIAANTVLSILAVDYPVDKVVSMLLFDALSETSKFARRWVPFCKKYSIEPRAPEFYFSQKIDYLKDNVQPTFVKERRAMKVGHKDRTKRMESLSLGTVLVIIQEWFRFDYDSNPLARSGRALDVEGKELPRLVYISREKRLGYNHHKKVGAMNALVRVSTVLSNAPFMLNLDCDHYINNSKAIREAMCFLMDPR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01605 283 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 283 - -
Vimu11g01605 283 Pfam Cellulose synthase 75 282 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01605 Vimu-Chr11 19805630 19807529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01605 2 283 Cell Wall Biosynthesis AT5G17420 61.513 3.65e-126 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01605 K10999 - gmx:100780354 432.565