Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01565 TTGGATCAAAGATCAATGAAAGGCAGTGGCTGCAGTGAAGCATCATCTGGTGGAGGAAACATGAATGGGAAACCTGCATGGCTAGAGAAGCTTATGGCTGAGACATTCTTTGGCAACTGTGGGGTCCACCAGAATCAAAAGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTACCTTAGCATCTGCCCCCACTGTCTCCCTTCTCACCGTTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTGTATCATGACGTGGTTCGATTGGGTGATCTAGAAAAGCTCGTCGATTGCGCCAATATTCAGCCATACACCATTAACGGTGCCAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATTTAAAGGCACTGCCAACACTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGTTCTCTGTCATGCAAGTTTGAGGGTCTAAGTGTTGATTGCTATACCGAATTTGTCCCCACTTCCTCTGAGGCTACAACTAGCATGGCCAACAACAACAATAACAAGCAGAACACAAATGGCTTCTTCATCTCTCTTGGAAGCAGAAGAAAGGGGGCTCCCCATAGAGCTCCTCTTTCCTAG 612 0.4673 MDQRSMKGSGCSEASSGGGNMNGKPAWLEKLMAETFFGNCGVHQNQKKNEKNVFCLHCYLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLEKLVDCANIQPYTINGAKVIFLNQRPQSRSFKGTANTCCTCDRILQEPFHFCSLSCKFEGLSVDCYTEFVPTSSEATTSMANNNNNKQNTNGFFISLGSRRKGAPHRAPLS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01565 203 MobiDBLite consensus disorder prediction 1 21 - -
Vimu11g01565 203 Pfam PLATZ transcription factor 79 149 IPR006734 -
Vimu11g01565 203 MobiDBLite consensus disorder prediction 1 19 - -
Vimu11g01565 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 21 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01565 Vimu-Chr11 18873644 18878343 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu11g01565 PLATZ 5.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01565 - - gmx:102668349 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01565 11 18873644 18878343 Vimu11g01565 11 18873644 18878343 ECH