Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01524 ATGCTAAATAAAGCACATACTTTGTGCTCAAAATTAATGGAATTTGTTAAAGGTAAAGGAAACCATCTTCACCAAAATGTCCAGTTGGATCAAGAAGTGATTGGAAATGGTTTAGATGGGCAATTTATTGTTGAATCTAAAACTAAAATTCAGGGGCTCAAAAGTGACACTGAGGGTTTAGCAAGGAGTTTGCACACGATGTCTTCTTTGTTGAAAGATAAGTCAAATCCATTGACTTCCAAATTTCAATCAGAGTGTACAATGGCTGGCTCGTTGTCGTTGAAGGCTCACTGCCGCCGTGATGCTTCGCCTCCACCATCGCCGAACTGTCGTTGCCATATAAGCACCGCACAAGCTGAAATGTTGCCATTTCTTTGTTTTGGTATGTCCCTCTCCCTTTTCAGTGGAAAAGGTGGTAGATTTTTTGATGGAATTTTGATGGGTGTCTCTGTTGTTTTACTTGTGTGGAGTGGGAGAAACTGGGGTTCTTTTGTTTTATTTTTTGTTGTTCATGTGGCATGTTGTGATATGTTGCAGTGTTGTTTCTCCTTGTTTCCTCTGGCTCGCGGGTTAAGATTAAGGAACTCTTTGAAGATTAAGATGCAGAGGATACAAGACTGGGACCCCAAGTTTTTCACACTTGCACATATACCAGAGAAATATCGTGTTTATGTTTCCAAGTTCATAAGGCAAGTGGTGATTGCTCGCATGTCTGAGTCACATGAATTAGCAGAAGATTACCATAGGAAATTGAGAGAAGCCTATGAAACTGAAGAGAAATTGAAAGAAGTAGATGTTTTAAGAAGGGGCAAAGAGCATTTGGTTAGATTGCTTGATAAGGTGGAGAGGCAACTGTGTGAAACACCTTTTTTGGCAGGTCAAGATTTTACCATGTCTGATGTGATGCTCATTCCAGTATTAGCTCGTTTAAAACTCTTGGATTTAGAGAAAGAGTACATAACTGGAAGGCCAAACATTGCTGAGTACTGGCTTTTGGTTCAACAAAGGCCCAATTATAAAAGGGTGATTGGTAAGTACTTCAATGGTTGGAGATAG 1056 0.3996 MLNKAHTLCSKLMEFVKGKGNHLHQNVQLDQEVIGNGLDGQFIVESKTKIQGLKSDTEGLARSLHTMSSLLKDKSNPLTSKFQSECTMAGSLSLKAHCRRDASPPPSPNCRCHISTAQAEMLPFLCFGMSLSLFSGKGGRFFDGILMGVSVVLLVWSGRNWGSFVLFFVVHVACCDMLQCCFSLFPLARGLRLRNSLKIKMQRIQDWDPKFFTLAHIPEKYRVYVSKFIRQVVIARMSESHELAEDYHRKLREAYETEEKLKEVDVLRRGKEHLVRLLDKVERQLCETPFLAGQDFTMSDVMLIPVLARLKLLDLEKEYITGRPNIAEYWLLVQQRPNYKRVIGKYFNGWR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01524 351 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 194 351 IPR010987 -
Vimu11g01524 351 Gene3D - 236 343 - -
Vimu11g01524 351 Pfam Glutathione S-transferase, C-terminal domain 267 329 - -
Vimu11g01524 351 CDD GST_C_family 243 330 - -
Vimu11g01524 351 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 201 351 IPR044617 GO:0004364
Vimu11g01524 351 SUPERFAMILY GST C-terminal domain-like 265 345 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01524 Vimu-Chr11 18124947 18128789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01524 201 351 Glutathione S-transferase Gene Family AT1G77290 66.887 2.37e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01524 K22077 - gmx:100808461 271.552