Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01516 ATGCCAATGGCTTCGACTCTCACAATAGTTAGAAATCCCATCTTCCTTACTCACCATTGCCAACTCAACAAGCACTTCACAACACCTTCTTCCTTACGCCTCCTCAGTTTCGCAAAGATGGAGGGAAGTGAGATTAGTGAGGAAGTGGGGGAGGATTCGAGAGCGAAGAGGAAAATTTTTGTTGCTGGCGCCACTGGTAGCACGGGGAAAAGAATCGTTGAGCAGTTATTGGCAAAGGGTTTTTCTGTTAAGGCTGGGGTTAGGGATTTGGACAAGGCCAAGTCTACCCTTTCCTCTGCCAACCCATCTCTTCAAATTGTAAAAGCTGATGTCACAGAGGGGTCTGATAAGCTAGCTGAAGCCATTGGTGATGATTCAGAAGCAGTGGTATGTGCCACAGGCTTTCGGCCGGGGTGGGATTTGCTTGCTCCGTGGAAGGTTGACAATTTTGGTACTGTAAACCTTGTTGAAGCATGCAGGAAACGTAATGTCAAGAGATTCATTCTTATCAGTTCCATTTTAGTTAATGGAGCATCTATGGGACAGCTACTCAATCCGGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAATTATATCAGGAAATCTGGCATAAACTACACAATTATAAGACCAGGCGGGTTGAGAAATGATCCTCCAACTGGAAATGTTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCAAGTTGCGGAAGTAGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTATAAAGTCGTGGAAATTGTGTCTCGCCCAGATGCTGCTAAGCGTTCATACCATGACCTTTTTGGTTCCATAAGGCAGCGATGA 876 0.4521 MPMASTLTIVRNPIFLTHHCQLNKHFTTPSSLRLLSFAKMEGSEISEEVGEDSRAKRKIFVAGATGSTGKRIVEQLLAKGFSVKAGVRDLDKAKSTLSSANPSLQIVKADVTEGSDKLAEAIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVKRFILISSILVNGASMGQLLNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVEALAYPEASYKVVEIVSRPDAAKRSYHDLFGSIRQR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01516 291 CDD SDR_a5 58 273 - -
Vimu11g01516 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 272 IPR036291 -
Vimu11g01516 291 PANTHER FLAVIN REDUCTASE-RELATED 51 289 - -
Vimu11g01516 291 Gene3D - 43 281 - -
Vimu11g01516 291 Pfam NAD(P)H-binding 63 260 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01516 Vimu-Chr11 18046185 18048263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01516 56 188 Monolignol Biosynthesis Gene Families AT2G33590 34.507 2.05e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01516 - - gmx:100812074 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01516 11 18046185 18048263 Vimu11g01516 11 18046185 18048263 ECH