Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01509 ATGTCGTGGGTTTCCCTGTTTGTGGATCACAAAAGAAATTGTGTTCGCTTGGTGGTGTTTTTTCATGTGAGGAATTTTGTCCTGCCTATTTGCTCTACAGTTTGTAGAACTATTATTGTTTTCGATGAAATTTTGATTGGAACGATGTACTTTGCCATAACAATAAAGAGATACCGAGCTGTGAAGGAAGTTGGACAAATTAAAATGAGTGTTGGAGTCATTGCGTACAACCAATTGATGCTTGTTTGCCAGACTCAGGAATATTTTCTCCCGGAGAAGATGGTACTTCCTTTGGCAGATGGCTCCATTGATGCTAATGCTCATATGCATGCTCCACTTTCTTCTGCCTTTGATGCTTTTTTACCTCCAGGTGTGGGGCAGATAACACCCTTTGAAAGATTTAAATTGCAACCCTCTGAGGCATGCCCCAAGAATTTTGTTATCTTTGATCAAACAGATCAGCGAAGTAGGATTATGTTCAATCCTGCAATGACCTACAAATTTAATAGTCCTGGCTTAAATGTTCATGCTAATTTTTCTCAAGATTTTGAGAAGAATAAAGTCAATCAAATGGAAAGAGAATTGTCATCTCCTTTTGAAGAAGATCCTAATGACATTGATGCATTGTTGAGCATAGGAGCTGATGAACTAGAAGACTTTGATGAGGAAGAAATAAGCACAGCAAGGACTCATGAAAATTATGAAAATTTATCTGATACTTGCTCCAGTTATTGCTCAAAATCAAGGAAGAAGAGGCTGTCATCATCTTCTGTACACAAGTCTTCTGAGGCTAATGATGGGAATAACAGGGAGATAAAGAGGATGGTGAGGATGTTGAGAAAGATCGTGCCTGGTGGAGGTAATCAAATGGATTCTGTTACTGTTTTAGATGAAGCTGTCAAGTACCTTAAGTCTCTCAAAGTTGAGGTGGAACAATTTGGAGTTGAACCATGA 954 0.3868 MSWVSLFVDHKRNCVRLVVFFHVRNFVLPICSTVCRTIIVFDEILIGTMYFAITIKRYRAVKEVGQIKMSVGVIAYNQLMLVCQTQEYFLPEKMVLPLADGSIDANAHMHAPLSSAFDAFLPPGVGQITPFERFKLQPSEACPKNFVIFDQTDQRSRIMFNPAMTYKFNSPGLNVHANFSQDFEKNKVNQMERELSSPFEEDPNDIDALLSIGADELEDFDEEEISTARTHENYENLSDTCSSYCSKSRKKRLSSSSVHKSSEANDGNNREIKRMVRMLRKIVPGGGNQMDSVTVLDEAVKYLKSLKVEVEQFGVEP 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01509 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 271 313 IPR036638 GO:0046983
Vimu11g01509 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 256 306 IPR011598 GO:0046983
Vimu11g01509 317 Gene3D - 269 314 IPR036638 GO:0046983
Vimu11g01509 317 PANTHER TRANSCRIPTION FACTOR BHLH145 115 316 IPR037546 -
Vimu11g01509 317 MobiDBLite consensus disorder prediction 252 271 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01509 108 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 41.525 2.06e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01509 - - vra:106768906 434.491