Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01466 ATGGGGTTCACCTTCACCACCATGACCCTGAACTTGCTCCTCCTTATAGCCATGGTGGCCACCAACATTATCTCCCTCTACCACCTCTCCTCCACCCTCCAATCCCCCAAATCCCCCAAACCACCACCACCTGTCCCAGACCAACTCCTACACCAGCTCCACACTATACGCGCCACCATCAACCACCTCACGCGCCTCCAGAATTCTAACCCCTCCAAAAAATCAACCATCCCCTCAGATCTACTCCTCTACTCACACCTCTCCCCAATTGCTTCATCATGCCACAACCACCCTGAACTCCTCCATAAATACATGACCTACACTCCCTTCTCTCTCTGTCCTTCCGATTCCGACCTCGCCGAATCCCTAATCCTCCGCGGATGCCACCCTCTCCCCCGCCGCCGCTGCTTCTCCCAAACGCCACAGAAACCCATTCCTCCAAATTCCCTCCCGCAAAACCCCTTCCCCTCCTCCCTCCCCGACAACGCCGTCGTTTGGGATCACTACACCTGCAAATCCTTTGATTGCCTCAACAGGCAAAACCCTAACCTCGGCTTCCAACCCTCACGCGACGTTTCCAAGTTCAATTCTTACAAGAGCGACTTGGATCTCCCGATTCACCAGCTGTTCCAGATCGCCAAGGCGGCGAAGTCGGTTCTCCGGCTCGGCCTCGATGTCGGCGGCGGCACCGGATCATTTGCCGCCGCCATGAAACTGCAAAACGTGACGGTGGTGACCACGACGATGAACGTGGCGGCGCCGAACAGCGAGGCCGTGGCGCTGCGGGGACTGGTGCCACTGCACGTGCCGCTTCAGCAGCGGCTGCCGCTGTTCGATGGAGTGGTGGATCTGGTGCGGTGCGGGCGTGCCGTGAACCGCTGGATCCCGGTGACGGTGTTGGAATTTCTGCTTTTTGATGCTGATAGGGTGCTGAGGGGTGGAGGGTACCTTTGGGTGGATCACTTTTTCAGCAAACGGGTGGATCTTGAGAAGGTGTATGCGCCATTGATTGGGAAATTGGGCTACAAGAAGGTGAAGTGGGCGACGGGGAATAAGACCGATGCCAGTGGCGTCAAGAATGGTGAAGTTTTCTTGACCGCATTGCTACAGAAGCCTGTGTCCAGATGA 1128 0.5674 MGFTFTTMTLNLLLLIAMVATNIISLYHLSSTLQSPKSPKPPPPVPDQLLHQLHTIRATINHLTRLQNSNPSKKSTIPSDLLLYSHLSPIASSCHNHPELLHKYMTYTPFSLCPSDSDLAESLILRGCHPLPRRRCFSQTPQKPIPPNSLPQNPFPSSLPDNAVVWDHYTCKSFDCLNRQNPNLGFQPSRDVSKFNSYKSDLDLPIHQLFQIAKAAKSVLRLGLDVGGGTGSFAAAMKLQNVTVVTTTMNVAAPNSEAVALRGLVPLHVPLQQRLPLFDGVVDLVRCGRAVNRWIPVTVLEFLLFDADRVLRGGGYLWVDHFFSKRVDLEKVYAPLIGKLGYKKVKWATGNKTDASGVKNGEVFLTALLQKPVSR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01466 375 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 9 374 - -
Vimu11g01466 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 224 347 IPR029063 -
Vimu11g01466 375 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 206 317 IPR004159 GO:0008168
Vimu11g01466 375 Gene3D Vaccinia Virus protein VP39 193 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01466 Vimu-Chr11 17149735 17154156 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01466 - - gmx:100816366 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01466 11 17149735 17154156 Vimu11g01466 11 17149735 17154156 ECH
Vimu11g01466 11 17149735 17154156 Vimu2g00338 2 1895622 1896166 PCT