Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01373 ATGGAGGACTGCACACTTCTGGGTTGGCTGCCTTGTCATCTGTATCTCCAATTACTGCACATGCTCCAGCAGAGAAAGGACCAGTATCTGCTGCTGTATCAAAGACAGATGCTGCTCCAATTGAGAGAGTTATCTGAACCGTACAAGGGAATTGGTGATTGTTTTGCTCGAACCATAAAGGATGAGGGTGTAATTGCTCTTTGGAGAGACAATACTGCCAATGTTATCAGATACTTCCCCACTCAGGCTTTGAACTTTGCTTTTAAGGATTACCTCAAGAGGCTATTTAACTTTAAAAAGGACAAAGATGGCTACTTGAAATGGTTTGCTGGAAATTTGGCATCTGGTGGGGCTGCTGGGGCTTCTTCTCTCTTATTTGTCTATTCTTTGGATTATGCCCGAACTGCTGCAAAGAAGGGTGGTGAGAGGCAGTTTAATGGTCTGATTGATGTATACAGGAAAACCATTAAGATGTCATCCACTTTAGTGGAAATCTCTTTTGACGAAGTCATTTATGTGTGTTTATCTTTAGCAATTGTGATGCTTCCAAACCCAGTCAACAATTTCACTGTTTCCAAAGTTCACAGTGAGGGGGAGTATGGTTCCAAGACACTGCAAGCCAAATATGGCAGTTCAAGCCACATAACTTTTAGCCACTACAGGCCCCATCACCCATCAGTCTCAGGGATGGCAGTCCCTGCAGTTTTGTCGCATTTAGCCACTATTGTCATTGTCCACCACTACTCTCCGTCATCCACTTTTGAAGTTGAAGTTCCACAAGATGCTATTAGTTGTTCGTTGACATGTGATAACACATTCAAAATCGAGTTTATCTATTTCAAGCTTGGTGCATACAATTTGTATGCTCCAGCTTGA 876 0.4258 MEDCTLLGWLPCHLYLQLLHMLQQRKDQYLLLYQRQMLLQLRELSEPYKGIGDCFARTIKDEGVIALWRDNTANVIRYFPTQALNFAFKDYLKRLFNFKKDKDGYLKWFAGNLASGGAAGASSLLFVYSLDYARTAAKKGGERQFNGLIDVYRKTIKMSSTLVEISFDEVIYVCLSLAIVMLPNPVNNFTVSKVHSEGEYGSKTLQAKYGSSSHITFSHYRPHHPSVSGMAVPAVLSHLATIVIVHHYSPSSTFEVEVPQDAISCSLTCDNTFKIEFIYFKLGAYNLYAPA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01373 291 ProSiteProfiles Solute carrier (Solcar) repeat profile. 3 95 IPR018108 -
Vimu11g01373 291 PRINTS Adenine nucleotide translocator signature 107 120 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu11g01373 291 PRINTS Adenine nucleotide translocator signature 81 93 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu11g01373 291 PRINTS Adenine nucleotide translocator signature 48 69 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu11g01373 291 SUPERFAMILY Mitochondrial carrier 32 157 IPR023395 -
Vimu11g01373 291 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 29 158 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu11g01373 291 PRINTS Mitochondrial carrier protein signature 122 140 IPR002067 GO:0055085
Vimu11g01373 291 PRINTS Mitochondrial carrier protein signature 70 90 IPR002067 GO:0055085
Vimu11g01373 291 Pfam Mitochondrial carrier protein 44 99 IPR018108 -
Vimu11g01373 291 Gene3D Mitochondrial carrier domain 16 161 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01373 Vimu-Chr11 15449701 15450791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01373 30 156 Antiporters AT4G28390 76.866 5.64e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01373 K05863 - gmx:100802974 206.068