Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01361 ATGGATGATTTAAACAAAGTTGGAGCCACAGGCAATGTGAAGCCTGCACTGTTAATGATACTGCTCCAGACTCTATATGCAATGGTGAATATCATGTTAAAGATAGTAGCAGATGATGGAATGAGCTTAAGTATTCTTGTTGCCTACAGATTCATCTTTGCTACTGCCTTCATTGTTCCCCTAGCTCTCATCGTTGAAAGGAAGAGTCTGCAATATGTTACTGGGCAAGTTGCATTCCAAGGTTTTCTCTGTGGGTTATTTGGGGGATCCTTACTACAAGGTATCTACGTTAAATCATTGGCCTTGACGTCTGCAGTATATGTTTCAGCCATGTTGAATCTCGTCCCTGGTGTCACCTACCTTATGTCTATTTCTCTCGGACTTGAGAAGACAAATCTTGGAACAGCAGGTGGCAGGGCCAAGTTGGTGGGAACTTTAATAGGAATTGGTGGTGCCATGATCCTCACTTTCTACAAAGGAAGAAAGCTATGCCTTTGGTCATCACATATTGGCTTGTTGGACCATGCACCATCACCAGATGGTGCCCCCACAGGTTCTCTCTTGTGGGGCTGCATACTAGCCTTTGGATCCGCTTTGAGTTACTCAGTGTGGTTGATAATCCAGACAAAGATGAGCGAGAAATTTCCGTGGCACTATTCAATTGCGGCTATGACATCTTCAACGGCCTCAATCCAATCCGTTTCATTTGTTTTCTTTATGGAGAGAGATTGGAGTAAGTGGAAAATTGGTTGGAACTTTAGGCTCATAACAGCAGTTTCTGCGGGAATTTTGGCCTCTGGAGTGTGTTACACCCTTTTAGCGTGGTGTGTGGGAAGGAAGGGACCAGTATTTGCGTCTGCTTTTAATCCTCTAATGGTGGTGATTGTGACCCTCGTCGAGCCTTTGATACTAGATGAATGTCCCAACCTTGGAAGGATCAGTGGTGGTTGTGGGGGGATTGTACCTGCTGCTGTGGGGAAAAAGCAAGGAAACACAGATGAAGCAGAACGAGGTGTTCTCAAAAGACTCTGTTCAATGTGA 1041 0.4476 MDDLNKVGATGNVKPALLMILLQTLYAMVNIMLKIVADDGMSLSILVAYRFIFATAFIVPLALIVERKSLQYVTGQVAFQGFLCGLFGGSLLQGIYVKSLALTSAVYVSAMLNLVPGVTYLMSISLGLEKTNLGTAGGRAKLVGTLIGIGGAMILTFYKGRKLCLWSSHIGLLDHAPSPDGAPTGSLLWGCILAFGSALSYSVWLIIQTKMSEKFPWHYSIAAMTSSTASIQSVSFVFFMERDWSKWKIGWNFRLITAVSAGILASGVCYTLLAWCVGRKGPVFASAFNPLMVVIVTLVEPLILDECPNLGRISGGCGGIVPAAVGKKQGNTDEAERGVLKRLCSM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01361 346 PANTHER WAT1-RELATED PROTEIN 14 308 IPR030184 GO:0016020|GO:0022857
Vimu11g01361 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 160 - -
Vimu11g01361 346 Pfam EamA-like transporter family 188 320 IPR000620 GO:0016020
Vimu11g01361 346 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020
Vimu11g01361 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01361 Vimu-Chr11 15239560 15241713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01361 13 316 Nodulin-like Gene Family AT1G25270 34.754 2.08e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01361 - - gsj:114424758 473.781