Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01360 TTGGTTTGTTTTGACACCATATTCCTAAACAAGAAAATGGTTCGTAAGTTGAAAGCATACATTCTAATGGTGTTTGTGCAATTTGCATATGCAGCTGTTAACATCATCTACAAGCTAGCCATAAACGATGGAATGAGCATGAGGGTAGTCACTGCCTATCGTCTCCTTTTTGCATCGCTTTTCACTGTTCCTGTCGCTCTTATATATGATAGGAACAATAGCTCAAAGATTACTTCCAAGGTGCTTTTCTTGGGATTCCTGTGTGGATTGTTTGGAGGAAGTTTATTCAGTAACCTTTACCTTGTGGCGATGGATTTGACATCAGCATCTTTTATGTTGGCTATGATCAATCTTACACCTGGCATTACCTTCATTATGGCCTTATCTTGCGGGTATCGGTTCTACAAATTTGGTTTGCACCCTAAAGCTGACATTCTAGACAATGATTGA 450 0.3933 MVCFDTIFLNKKMVRKLKAYILMVFVQFAYAAVNIIYKLAINDGMSMRVVTAYRLLFASLFTVPVALIYDRNNSSKITSKVLFLGFLCGLFGGSLFSNLYLVAMDLTSASFMLAMINLTPGITFIMALSCGYRFYKFGLHPKADILDND 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01360 149 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 127 - -
Vimu11g01360 149 PANTHER WAT1-RELATED PROTEIN 20 128 IPR030184 GO:0016020|GO:0022857
Vimu11g01360 149 Pfam EamA-like transporter family 18 127 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01360 Vimu-Chr11 15235427 15236217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01360 15 148 Nodulin-like Gene Family AT5G13670 37.956 1.06e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01360 - - gmx:100803545 154.066