Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01359 ATGATTTTAATTCATACTAGTACTTTAGCCAAATTAAGTTTTGATTATATATATAGATTGGAAAAGTTAAATCTGGAAGTAGCAGAAGGGAGGGCGAAGGTGATAGGAACCATAATTGGAATTAGTGGGGCAATGTTTGTGACCTTTGTGAAAGGCACAGAAATTAATATTTGTTCGTTTAAAATCAACCTTATGCATGGGCATGCATCATCATCACCCACTCAGTTTCGAAACAAGTTGTTGGGAGTTCCGTTGGCCATTCTCAGCTGCTGCTTTTATTCTCTCTGGTTCATCCTTCAGGGAATTGTGGCCTCTGGAATAATGGTTGTGATCATTGCCTGGTGCATAAAGAGGAGAGGTCCTCTATTTGTGGCTATTTTCAGTCCTCTACAGCTTGTGCTAGTGGATATAGCTGCATATTTTATGTTAGATGAGAAATTATATGTAGGAAGTGTGGTTGGAGCAGTGATGATCGTGTGCGGTCTATACGTGGTGCTCTGGGGTAAAGCCAAAGAAATGAAAAAGAAGTCTGAATTAGTCTCATTGGAAAACACAACCAGAAGAGAGTTCGAAAATGTTGAGGTTGTAAGCTCACCACCTAGGTCACAACAACTATGA 618 0.3981 MILIHTSTLAKLSFDYIYRLEKLNLEVAEGRAKVIGTIIGISGAMFVTFVKGTEINICSFKINLMHGHASSSPTQFRNKLLGVPLAILSCCFYSLWFILQGIVASGIMVVIIAWCIKRRGPLFVAIFSPLQLVLVDIAAYFMLDEKLYVGSVVGAVMIVCGLYVVLWGKAKEMKKKSELVSLENTTRREFENVEVVSSPPRSQQL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01359 205 PANTHER WAT1-RELATED PROTEIN 99 177 IPR030184 GO:0016020|GO:0022857
Vimu11g01359 205 SUPERFAMILY Multidrug resistance efflux transporter EmrE 87 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01359 Vimu-Chr11 15223422 15224911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01359 7 191 Nodulin-like Gene Family AT1G25270 32.636 2.94e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01359 - - gsj:114424758 234.572