Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01358 ATGCAAGACCTAAACCCTGTGCTGCTGATGGTATTGGTTCAAATTGCGTATTCTTCTGTTAATGTGCTTTATAAGCTTGCCATAAATGATGGAATGAGCATTAGGGTAGTCACTGCCTACCGTCTTATTTTTGCAGTAGTTTTCACTTTTTCTCTTGCTCTTATTTTCGAAAGTGCAAGTTTATTGCATAATCTATTCCTGGAGGCCTTGGATTTGGTGTCTGCAACATTCGCTACAGCAATTTATAATCTTGTTCCTGCAGTCACTTTTATTTTGGCAATCTCGTGCGGCATGGAAAAGTTGAATATGAGAAGCACAGCAGGGAAGGCCAAGGTGGTGGGAACGATAATAGGAATTGGAGGATCAATGTTTCTGACATTTTTCAAAGGGCAAGAAATTGATGTTAAGAGTTTCCACACTGATCTTCTGCATAAAAATGACCATGCTTTAACTCTGCATAATACTGACTCTAGCCATAGATTTCTGGGTGCTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCTAAGATAAACAAAGAATACCCCAGTCATCACTCAAGTACTGCGTTGATGTCCTTAATGGCTGCAATACAAGCCACAGCCTTTGCCCTTTATGTTGAAAAGGACTGGAACCAGTGGAAGTTGTGTTCCAGTATTAGGATTCTAACTGTGGTTTATACGGGAATCGTGGCCTCTGGATTAGTGGTAATCGCCATTGCATGGTGTGTAAAAATGAGAGGTCCGATGTTTGTATCTGTTTTCAACCCTCTGATGCTCGTGCTTGTGGCTGTGGCTGATTGCTTGATGTTAGGTGAAAACTTATATGTAGGAAGTGTGATTGGAGGCGTGCTAATTGTGTGTGGGTTGTACATGTTTCTATGGGGTAAAAGCAAAGAAGTGAAAAAGGTGAATAAGTCAGTGTCGTCAGAAATCACCCAGAAACATGAAGCAACCGAAGTAGTTGTCATGTCGACCACAACAAAAGTGACTACATTAGCAGTACCAAACCCAATAACATAG 1041 0.4102 MQDLNPVLLMVLVQIAYSSVNVLYKLAINDGMSIRVVTAYRLIFAVVFTFSLALIFESASLLHNLFLEALDLVSATFATAIYNLVPAVTFILAISCGMEKLNMRSTAGKAKVVGTIIGIGGSMFLTFFKGQEIDVKSFHTDLLHKNDHALTLHNTDSSHRFLGALCGFGSCFSFALWLIIQSKINKEYPSHHSSTALMSLMAAIQATAFALYVEKDWNQWKLCSSIRILTVVYTGIVASGLVVIAIAWCVKMRGPMFVSVFNPLMLVLVAVADCLMLGENLYVGSVIGGVLIVCGLYMFLWGKSKEVKKVNKSVSSEITQKHEATEVVVMSTTTKVTTLAVPNPIT 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01358 346 PANTHER WAT1-RELATED PROTEIN 5 312 IPR030184 GO:0016020|GO:0022857
Vimu11g01358 346 Pfam EamA-like transporter family 162 300 IPR000620 GO:0016020
Vimu11g01358 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01358 Vimu-Chr11 15208770 15211787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01358 2 321 Nodulin-like Gene Family AT1G68170 37.243 1.57e-71 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01358 - - gmx:100813812 523.472