Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01357 ATGAACCATATAGTGAAAGTGGTGCAAGACTTGAAGCCTCCCTTACTGATGGTGCTGGTGCAGATTGCATATGCTGGAAATACTGTAATTGCTAGCCTTGCCATAACTGATGGAATCAACATTAGAGTCTTTAGTGCCTACCGTCTTATTTTCGGAGCAGTTATCACTATTATTCTTGCTCTAATTTTCGAGAGCTATGAAAAGTTAAATTTGCAAACCGCAGCAGGGAAAGCTAAGGTGATGGGAACAGTAATTGGAGTTATTGGGTCAATGTTGTTGTCATTCTTCAAAGGGTTAAAAATAAATATTTGGAAAAATATTCACATTAATCTTATGGATAAAAGGGACAACAATCAGATGAGAGCATATGATGGAAAAGAGTGGATAGGTGTTCTAAGTGGTATGGATGTTGCTTTAGTTTTTCAGTATGGCTCATCATTCAGGTATATGTTACCTTTTTTCTTTTATATATACACATGTTACATCTATCCAGTACAAGCCACAGTCTTTGCACTTTGTGTTGAAAAAGATTGGAATCAATGGAAGTTGCCTTCAGCTATTAGGATTTTGGCCGCACTCTATTCGGGAATTGTGGTCACTGCATTTGTGAATATTGTCACTGCATGGTGTGTACATAAGAGAGGTCCATTATATGCATCATTATTTAATCCCCTTAGCCTTGTGCTCGTGGCTCCTACTGCTTCCTTCTTGTTACAAGAGAAACTATACCTTGGAAGAATACTTGGCGCAACGCTAATTGTGTGTGGCTTGTACATGGTGTTGTGGGGTAAAAGCAAAGATATGAAACCACCAGCTGATTTGGTGTCATCAGAGACAGAATCAAGTACGACTGAGCTTGTTGTAGTGTCTGCCAACAATAACAGTCACCATGTTAGCAATAACCAGGTGAATAGTAAGAGAAATATTGTAACAGGCTCTTTGAGAAATGGTGATCATCAAATGAATGACATCGATAATAATAGGAGCAAGGAATCGAAGTAG 1002 0.3852 MNHIVKVVQDLKPPLLMVLVQIAYAGNTVIASLAITDGINIRVFSAYRLIFGAVITIILALIFESYEKLNLQTAAGKAKVMGTVIGVIGSMLLSFFKGLKINIWKNIHINLMDKRDNNQMRAYDGKEWIGVLSGMDVALVFQYGSSFRYMLPFFFYIYTCYIYPVQATVFALCVEKDWNQWKLPSAIRILAALYSGIVVTAFVNIVTAWCVHKRGPLYASLFNPLSLVLVAPTASFLLQEKLYLGRILGATLIVCGLYMVLWGKSKDMKPPADLVSSETESSTTELVVVSANNNSHHVSNNQVNSKRNIVTGSLRNGDHQMNDIDNNRSKESK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01357 333 Pfam EamA-like transporter family 147 261 IPR000620 GO:0016020
Vimu11g01357 333 PANTHER WAT1-RELATED PROTEIN 12 60 IPR030184 GO:0016020|GO:0022857
Vimu11g01357 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 181 266 - -
Vimu11g01357 333 MobiDBLite consensus disorder prediction 312 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01357 Vimu-Chr11 15184283 15191918 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01357 44 318 Nodulin-like Gene Family AT1G25270 32.384 3.01e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01357 - - vum:124820047 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01357 11 15184283 15191918 Vimu11g01357 11 15184283 15191918 ECH
Vimu2g00353 2 1986406 1988311 Vimu11g01357 11 15184283 15191918 PCT