Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01355 ATGGCGGCAGTACAAGCCACTGTCTTTGCCCTTTGCGTTGAAAAAGATTGGAATCAATGGAAGTTGCCTTCAACTATTAGGATTTTGGCGACACTCTATTCGGGAATTGCAATCACTACATTTGTGAATATTGTCACTTCATGGTGTGTACGGAAGATAGGTCCATTATATGCATCTGTATTCAATCCCCTTGAGCTCGTGCTCGTGGCTGCCACTGCTCCCCTTTTATTACAAGAGAAACTTTACCTTGGAAGTAAAAGCAAAGAAATAAAACCAGAAACTTATTTGGTGTCATCAGAGATGGAATTAAGTACGACTGAGGTTGCTGTAGTGTCTGCCAACGATAAGAGTGATCATGTTAGCAATAACCAGGTGAATAGTAAGAGCAACTCTGTAAACAAAGGATCTTAA 411 0.4063 MAAVQATVFALCVEKDWNQWKLPSTIRILATLYSGIAITTFVNIVTSWCVRKIGPLYASVFNPLELVLVAATAPLLLQEKLYLGSKSKEIKPETYLVSSEMELSTTEVAVVSANDKSDHVSNNQVNSKSNSVNKGS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01355 136 PANTHER WAT1-RELATED PROTEIN 1 85 IPR030184 GO:0016020|GO:0022857
Vimu11g01355 136 SUPERFAMILY Multidrug resistance efflux transporter EmrE 20 83 - -
Vimu11g01355 136 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01355 Vimu-Chr11 15156653 15157595 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01355 8 134 Nodulin-like Gene Family AT1G25270 37.037 4.94e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01355 - - vum:124820047 196.438