Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01354 ATGAATAGAGGAAAATTATTCCAAAATCTTTTCTTCACAGCCATAGCGTTGCTGTCAGCAACATATGCTAACGCTATTTTTAACCTAGTTCCTATGGTCAATTTTGTCTTCTCCTTCCTGTGCGGGTATCTACGAAAAGTTAAACTTGCGACTGCAGTAGGGAAAGCTAAGGTGATAGGAACAATAATTGGAGTTAACGGGACAATGATTATGTCATTCTTCAAAGGGGTAGAAATAAATATTTTGAAGAATATTCACATTAATCTTATGCATGAAAAGGACAACAATAAAATAGGAGTTTCATATGCAAAATAG 315 0.346 MNRGKLFQNLFFTAIALLSATYANAIFNLVPMVNFVFSFLCGYLRKVKLATAVGKAKVIGTIIGVNGTMIMSFFKGVEINILKNIHINLMHEKDNNKIGVSYAK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01354 104 PANTHER WAT1-RELATED PROTEIN 6 90 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01354 Vimu-Chr11 15077771 15078184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01354 2 96 Nodulin-like Gene Family AT4G24980 36.735 5.69e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01354 - - vum:124820047 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01354 11 15077771 15078184 Vimu11g01354 11 15077771 15078184 ECH
Vimu2g00354 2 2001533 2003494 Vimu11g01354 11 15077771 15078184 PCT