Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01353 ACTAACAAAGCCAATACAATGAATCGTATAGTGAAAGTGGTGCAAGAGTTGAAGCCTCTCTTACTGATGATGTTGGTGCAGGTAGCATATACTGGAAATACGGTGATTGCTAGCCTTGCCATAACTGATGGAATGAGCATTAGAGTATTCAGTGCCTACCGTCACATCTTTGGAGCTTTTATCACTTTTATTCTTGTTCTTATTTTTGAAAGAAAGAACAGACCAAAGTTGACATGGAGGGTGCTCGTGATGACATTTTTTTGCGGATTATTTGGTGGGAGTTTATTTCAAAATCTTTTTTTCATCGCGATAGCGTTGGTATCAGCAACATATGCTAACGCTATTATGAACATGGTTCCTGTGGTCACTTTCATCCTCTCCTTGTTGTGCGGCTACGAAAAGTTAAACTTGCGAACTGTAGCAGGGAAAGCTAAGGTGATGGGAACAATAATTGGAGTTAACGGGACAATGATGTTGTCATTCTACAAAGGGATAGAAATAAATATTTGGAAGAATATTCACATTAATCTTTTACATAAAAAGGACAACGGTCAGAAAGGAGCATCAGATGGAAAAGTGTGGATAGGTGTTCTAAGTGGTATTGGATGTTGCTTTAGTTTTTCAGTATGGCTCATCATTCAGGCTAAGTTGAGTAAGGAATATCCAAGCCACCACTTAAGTACATCGTTAATGAATTCCATGGCGGCAGTACAAGCCACTGTCTTTGCCCTTTGCATTGAAAAAGATTGGAATCAATGGAAGTTGCCTTCAGCAATTAGGATTTTGGCGGCACTGTATTCGGGAATTGCGGTCACTGCATTTGTGAATAATGCCACTGCATGGTGTGTACAAAAGAGAGGTCCATTATATGCATCTGTATTCAATCCCCTTAGCCTTGTGCTGGTGGCTGCCACAACTCCCCTCTTATTACAAGAGAAACTATACCTTGGAAGTGTACTTGGCGCAACGCTAATTGTGTGTGGCTTGTACATGGTGCTGTGGAGTAAAAGCAAAGAAATGAAACCACAAATTGATTTGGAGTCATCAGAGACAGAATTAAGTACTACGACTGGGGTTGTTGTAGTGTCCACTAATGATAAGAGTGATCATGTTGGCAATAATAGGTGA 1128 0.4025 TNKANTMNRIVKVVQELKPLLLMMLVQVAYTGNTVIASLAITDGMSIRVFSAYRHIFGAFITFILVLIFERKNRPKLTWRVLVMTFFCGLFGGSLFQNLFFIAIALVSATYANAIMNMVPVVTFILSLLCGYEKLNLRTVAGKAKVMGTIIGVNGTMMLSFYKGIEINIWKNIHINLLHKKDNGQKGASDGKVWIGVLSGIGCCFSFSVWLIIQAKLSKEYPSHHLSTSLMNSMAAVQATVFALCIEKDWNQWKLPSAIRILAALYSGIAVTAFVNNATAWCVQKRGPLYASVFNPLSLVLVAATTPLLLQEKLYLGSVLGATLIVCGLYMVLWSKSKEMKPQIDLESSETELSTTTGVVVVSTNDKSDHVGNNR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01353 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 154 - -
Vimu11g01353 375 PANTHER WAT1-RELATED PROTEIN 18 347 IPR030184 GO:0016020|GO:0022857
Vimu11g01353 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 338 - -
Vimu11g01353 375 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020
Vimu11g01353 375 Pfam EamA-like transporter family 18 147 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01353 Vimu-Chr11 15057538 15063448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01353 17 373 Nodulin-like Gene Family AT1G25270 37.535 1.08e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01353 - - vum:124820047 619.002