Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01352 ATGCTGTGGCAGGGAATTGTGCTATCTGGAGTTGTTGTTATTGTCACTGCTTGGTGTGTAGGGGTTAAAGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCACTTGTCATTGTGGCTATTTTTGCCCCTTTGCTGTTGGAGGAAAACCTATATCTAGGAAGTGTCATTGGAGCCGTGCTTATTGTGTCTGGATTGTACATGGTGCTGTGGGGTAAAAACAAAGAAATAAAAACATCATCGGAAAAAACGAAACATGTTGAAGCGAGTTCAGTTGTTGAAATTACCAACAGTGATATTAGTTACATGGTTGACAATGAGAGTATCCGAGAACGGACATGA 342 0.4123 MLWQGIVLSGVVVIVTAWCVGVKGPLYASVFNPLSLVIVAIFAPLLLEENLYLGSVIGAVLIVSGLYMVLWGKNKEIKTSSEKTKHVEASSVVEITNSDISYMVDNESIRERT 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01352 113 PANTHER WAT1-RELATED PROTEIN 3 82 IPR030184 GO:0016020|GO:0022857
Vimu11g01352 113 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01352 Vimu-Chr11 15024684 15025150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01352 2 90 Nodulin-like Gene Family AT1G25270 50.562 1.81e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01352 - - var:108326689 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01352 11 15024684 15025150 Vimu11g01352 11 15024684 15025150 ECH
Vimu10g01800 10 25435366 25436974 Vimu11g01352 11 15024684 15025150 ECH