Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01350 ATGAAATATCATAGGAAAGTAGTGCAAGAGCTGAAGCCTGCATCGTTAATGGTGCTGTCGCAGGTTGCAACTGGGGTTATGAACGTGCTTTATAAATTGACCATAAATGATGGAATGAGCATTATGGTCCTCACTTCCTACCGTCACATTTTTGGAGCTGCATTCTCTCTTTCTCTTGCTCTTCTTATAGAAAGAAAGAGCAGGCCAAAGTTGACATGGAGGGTGCTTTTGATGGCATTTTTTTGCGGTCTATTTGGGGGCAGTTTAGCCCAAAATCTTTATTTCATCGGTTTGGCTTGGGTATCAGCAACATTTGCTACTTCCCTTTATAATCTCGTTCCTGTAGTTACTTTTATCTTCTCCCTTTTGTTCGGCTTGGAAAAGTTAAGCTTGCGAACCGCCTCAGGGAGGGTGAAGGTGTTGGGACCAATAATAGGAATTGTTGGGTCAATGCTGTTGACATTTTACAGAGGGGCAGAAATTAAGATCTGGAGATTCCACACTAGTCTCTTACATAAAAATCAAAAGGGGCACCTAGGATCATTGCACGTTGACTCTGGAAGAAGATGGGTAGGTGTTTTATGTGGTCTTGGAAGTGTTCTAAGTTTTTCATCATGGCTCATAATTCAGACAAGGATGAGCAAAGAATATCCAAGCCATCTCTCAAGTGCTGCATTGATGACCTTAATGGGGGCAATACAAGCCACAATCTTTGCTCTATGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAGTATCAGGCTTCTAACTGCAGCTTTCTCTGTATATATATATATATATGCTAGTTTCATATTTATCATTTGA 831 0.4128 MKYHRKVVQELKPASLMVLSQVATGVMNVLYKLTINDGMSIMVLTSYRHIFGAAFSLSLALLIERKSRPKLTWRVLLMAFFCGLFGGSLAQNLYFIGLAWVSATFATSLYNLVPVVTFIFSLLFGLEKLSLRTASGRVKVLGPIIGIVGSMLLTFYRGAEIKIWRFHTSLLHKNQKGHLGSLHVDSGRRWVGVLCGLGSVLSFSSWLIIQTRMSKEYPSHLSSAALMTLMGAIQATIFALCVEKDWSQWRLGWSIRLLTAAFSVYIYIYASFIFII 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01350 276 Pfam EamA-like transporter family 13 140 IPR000620 GO:0016020
Vimu11g01350 276 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 147 - -
Vimu11g01350 276 PANTHER WAT1-RELATED PROTEIN 13 267 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01350 Vimu-Chr11 15023365 15024637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01350 11 263 Nodulin-like Gene Family AT1G25270 39.130 1.45e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01350 - - var:108326689 490.345