Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01348 ATGGAAAGAGCGCAGTGGCTTCGTCCAGCAGTTTTAGGAGCCAATGATGGGTTGGTTTCGGTTGCTTCATTGATGATGGGTGTAGGAGCTGTAAAAAAAGACCCAAAGGCTATGCTACTTGCTGGTTTTGCAGGGTTGGTTTCAGGGGCTTGTGGTATGGCGATAGGAGAGTTCGTTGCAGTGTACACTCAGTATGATGTTGAAATTGGTCAAATGAAGAGAGATATGGAGATGGAAATGGAGAAAAGAACATTACCTAATCCACTGCAAGCTACTTTGGCATCTGCAGTATCCTTTTCTATAGGTGCATTGATACCTCTACTTTCTGCCGCTTTCATAGAATGTTACTTGACAAGGCTTATTGTGGTTGTGGCTACGGCTAGCTTCGCTTTGCTGGTGTTTGGAAGAGTGGCGGCTCAACTGGGAAAAACTCCTAAGTTAAAATCTCATGTAAGGTTCCTTCTTGGAGGATGGATAGCCATGGCCATCACTTTTGGGTTAAGCAAATTACTGGGTACTAGTGCTTTAATGTAG 534 0.4419 MERAQWLRPAVLGANDGLVSVASLMMGVGAVKKDPKAMLLAGFAGLVSGACGMAIGEFVAVYTQYDVEIGQMKRDMEMEMEKRTLPNPLQATLASAVSFSIGALIPLLSAAFIECYLTRLIVVVATASFALLVFGRVAAQLGKTPKLKSHVRFLLGGWIAMAITFGLSKLLGTSALM 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01348 177 CDD Nodulin-21 5 146 - -
Vimu11g01348 177 Pfam VIT family 7 75 IPR008217 GO:0005384|GO:0030026
Vimu11g01348 177 Pfam VIT family 77 167 IPR008217 GO:0005384|GO:0030026
Vimu11g01348 177 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 2 171 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01348 Vimu-Chr11 14939530 14940093 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01348 2 176 Nodulin-like Gene Family AT3G43660 61.714 3.31e-77 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01348 K22736 - gmx:100803012 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01348 11 14939530 14940093 Vimu11g01348 11 14939530 14940093 ECH